Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1230 246 2e-60 >seq1230 Length=159902609 Score = 246 bits (272), Expect = 2e-60 Identities = 515/763 (67%), Gaps = 6/763 (1%) Strand=Plus/Minus Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957 ||||||||||| |||||| || | || | || ||||| ||| ||| ||| Sbjct 40602625 TAAACAGCCATTTCCATTTTAATAGTTGGATGCGGATTATAACCTTCAGTCTTAAAGTCT 40602566 Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017 | ||||| ||||||||||| | ||| |||| | || || | |||||||| Sbjct 40602565 TCAGCTTTTAAATCATCAATTGTCTCAACTTTTCGAAGGATTTTGAGCTTCGGGAAAGGT 40602506 Query 97018 CTGGGAGTTCGCGTAAGCTGC-TCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGC 97076 || || |||| |||||| ||| | || | || |||||||||| |||||||| || Sbjct 40602505 CTTGGTTCTCGCTGAAGCTGAATCT-TCAGCGGCTCGATGTGATTCAGGTAAATGTGTGC 40602447 Query 97077 ATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAG--TGACATGGGCGATCATA 97134 |||||| ||||| |||| ||| || || || || | | | ||| || |||||||| Sbjct 40602446 ATCTCCCAAAGTATGAACAAAGTCACCTGG--CTTGAGCCGGGTGATGTGCGCGATCATG 40602389 Query 97135 CAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGAT 97194 | || | || | ||||| || ||||| || |||| || || ||||| || | || Sbjct 40602388 TACGTGAGCAGGGCGTAGCTGGCGATGTTGAATGGCATGCCCAGGCCCATGTCTCCCGAC 40602329 Query 97195 CTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTGACTCAATACATGA 97254 | || || | ||| ||||| |||| || || ||| || ||||| | | || ||| Sbjct 40602328 CGCTGGTACAGCTGGCAGGACAGCTCGCCGTCCACCACGTAGAACTGGCAGAGGACGTGA 40602269 Query 97255 CAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTT 97314 || ||||||| |||||| || | |||| ||||||||||||||| | |||||| Sbjct 40602268 CACGGGGGCAGCGCCATCAGAGGGAGATCTTTTGGATTCCAAGCACACATGATGATTCTT 40602209 Query 97315 CTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCT 97374 || ||| |||| || | ||||||| || | | | | ||| ||||| |||| Sbjct 40602208 CTGTCGTCAGGGTGGGTTTTGATGGTATCGATCACTTTTTGCAGTTGGTCAACTCCTTGA 40602149 Query 97375 CCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCA 97434 || ||||| | | | ||| ||||| || |||||||||||||| ||||| ||| Sbjct 40602148 CCTGAATAATCTGAATCCATATCTTTGTATTCGGCCCCAAAATGCCTCCACTGGAAGCCA 40602089 Query 97435 TAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGAC 97494 ||||| || || | ||| |||||| |||| | |||| || || ||| | | || Sbjct 40602088 TAAACTGGGCCCAAGTCCCCTTCTCCTCTGGTAGAGAATCCCAGGCCATCCAGAAAGTCT 40602029 Query 97495 CTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTA 97554 | |||||||| |||||||| || | ||| || | | || ||||| || || Sbjct 40602028 CGGGATCCATTGGCATCCCAGATCTTCACTCCCTTCGAAGACAGTTCTTTAGCGTTTGTG 40601969 Query 97555 GATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTT 97614 ||||| |||||||||||| ||| || |||| |||||| |||| || || || ||| Sbjct 40601968 GATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTTCCAGAACACATGTTTGGTT 40601909 Query 97615 GTTAAGAGAGGAAAATCCTTTTCTAAGCTGTATCTAGACTGCA 97657 || | |||||||| || | | | |||||| | | ||||| Sbjct 40601908 GTCAGCAGAGGAAATTCATCTCTCAGGCTGTAGCGCGCCTGCA 40601866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346751549470460