Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq233 95.1 2e-14 >seq233 Length=141296404 Score = 95.1 bits (104), Expect = 2e-14 Identities = 165/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || |||| || || ||||| || ||||| ||| | ||| | ||| | Sbjct 109921892 ATGCAGATTTTCGTAAAAACCCTTACAGGAAAGACTATCACTCTGGAGGTCGAACCCTCG 109921833 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATT----CAAGATAAAGAAGGTATACCACCTGA 124654 |||||||| ||| |||| || || || ||||||||||| || || ||||| Sbjct 109921832 GATACAATAGAAAATGTAAAGGCCAAGATAAGGCCAGGATAAAGAAGGAATTCCTCCTGA 109921773 Query 124655 TCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTA 124714 ||| ||||| || |||||||| || || ||| |||| ||| | || || || || || Sbjct 109921772 TCAGCAAAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGTACTTTGTCTGACTA 109921713 Query 124715 TAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||||| || || || ||| | ||| | || || | | | ||||||| ||| || Sbjct 109921712 CAACATTCAGAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTTGTGGTGGTACTAAGAA 109921653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755383495110400