Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1230 86.0 5e-12 >seq1230 Length=159902609 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| || ||| | || || || || || ||| | || ||| | | || Sbjct 130889010 ATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACCATCACCCTTGAGGTCAAGCCCAGT 130889069 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | | ||| || | ||||| | || || ||| | || ||||||| Sbjct 130889070 GACACCATCAAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 130889129 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | | | |||| |||||||||||| ||||| ||| | ||| | ||||||| | Sbjct 130889130 CAGCATCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCGGATTACAAC 130889189 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || |||||||||||||| || || | ||| | || |||| || || Sbjct 130889190 ATCCAGAAAGAGGCCACCCTGCACCTGGTGCTTCGTCTGCGAGGTGG 130889236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418264856941760