Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq3973 141 8e-29 >seq3973 Length=36798880 Score = 141 bits (156), Expect = 8e-29 Identities = 117/143 (82%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| ||||||||||||| ||||||||||| || ||||| ||||| ||||| Sbjct 30404655 GGTTGCCAAGCCTTGTCTGAGATGATCCAGTTCTACCTGGAGGAGGTGATGCCGCAGGCT 30404596 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||||| || ||||| ||||| ||||| || |||||||| || |||||||| || Sbjct 30404595 GAGAACCACGGCCCGGACATCAAAGAGCACGTGAACTCCCTGGGGGAGAAGCTGAAAACG 30404536 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 |||| || || ||||| ||||| Sbjct 30404535 CTGAGGCTGCGGCTGCGGCGCTG 30404513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430014157390736