Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 4e-14 seq2763 87.8 2e-12 >seq1 Length=114275543 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || |||||||| | || |||||| | ||||| | ||| | ||| | Sbjct 8597490 CAAGATGCAGATTTTCGTAAAAACCCTTACAGGAAAAACTATCACTCTTGAAGTTGAACC 8597549 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || || || | || || ||||| || || ||||| || ||||| || Sbjct 8597550 CTCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 8597609 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| |||||||| |||| | ||||| ||||| ||||||| | | | ||||| Sbjct 8597610 TCAGCAAAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGTACTTTGTCTGACTA 8597669 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || ||| | ||||| || |||||||| | || || Sbjct 8597670 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 8597720 >seq2763 Length=65901067 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 |||||||||| | ||||| || || | || || || | |||||| | || | || | Sbjct 60922474 CAAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAGCC 60922533 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | |||||||||||| | || || ||||| || || |||||||| ||||| || Sbjct 60922534 CAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCTCCTGA 60922593 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 || || || ||||| | | |||||| || || ||||||| | | | ||||| Sbjct 60922594 CCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTA 60922653 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| || ||||| || || | || ||||||||| | || || || || Sbjct 60922654 CAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGG 60922704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478616460376160