Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3640 132 4e-26 seq520 129 5e-25 seq1230 127 2e-24 seq3641 125 6e-24 seq3972 123 2e-23 seq1 123 2e-23 seq3398 114 1e-20 seq1582 111 1e-19 seq2763 98.7 8e-16 seq1989 91.5 1e-13 seq233 86.0 5e-12 >seq3640 Length=31815103 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || ||||| ||| | Sbjct 21636356 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 21636415 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| ||| || ||||||||||| || || || || ||||| Sbjct 21636416 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGATCAG 21636475 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || |||||||| || ||| | || ||| |||||| |||| || |||||| Sbjct 21636476 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAAC 21636535 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||| |||||| | || || || |||| ||| | |||||| Sbjct 21636536 ATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGGT 21636583 >seq520 Length=73916538 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || ||||| || || | ||||| || || |||| || || || || ||| Sbjct 72484324 GATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGCCCAG 72484265 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 |||||| | || || |||| ||| || ||||||||||| || ||||| || |||| Sbjct 72484264 TGATACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCCCCTGATCC 72484205 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 || | || || ||||| || || ||| | || ||| |||||| |||| || ||||| Sbjct 72484204 GCAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAA 72484145 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||| || ||||| |||||||| || || || |||| ||| | |||||| Sbjct 72484144 CATCCAGAAAGAGTCCACCATGCACTTGGTCCTGCGCTTGAGGGGAGGT 72484096 >seq1230 Length=159902609 Score = 127 bits (140), Expect = 2e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| || | ||| Sbjct 130889008 AGATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACCATCACCCTTGAGGTCAAGCCCA 130889067 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| | | || ||||| ||||| |||||||||||||| || ||||| || | Sbjct 130889068 GTGACACCATCAAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 130889127 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | ||| |||||||| ||||||||| | |||||| |||||| | || ||||||| Sbjct 130889128 AGCAGCATCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCGGATTACA 130889187 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || ||||| ||||| Sbjct 130889188 ACATCCAGAAAGAGGCCACC 130889207 >seq3641 Length=30143674 Score = 125 bits (138), Expect = 6e-24 Identities = 149/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || | | |||| ||||| || || ||| Sbjct 24919678 AGATGCAGATCTTTGTGAAGACCCTGACGGGGACCA---TCACCCTTGAGGTCGAGCCCA 24919734 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| || | || ||||| ||||| |||||||||||||| || ||||| || | Sbjct 24919735 GTGACACCATG-AGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 24919793 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| ||||||| ||||||||| | |||||| |||||| | || ||||||| Sbjct 24919794 AGCAGCGTCTGATATTTGGGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCGGATTACA 24919853 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || ||||| |||||| Sbjct 24919854 ACATCCAGAAAGAGTCCACC 24919873 >seq3972 Length=29216678 Score = 123 bits (136), Expect = 2e-23 Identities = 148/200 (74%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || |||| || || || || || | | | || | ||||| || || ||| Sbjct 8003424 AGATGCAGATCTTTGCGAAGACCTTGACGGGGAGACCA-TCGCCCTTGAGGTCGAGCCCA 8003366 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 ||| ||| | || || ||||| ||||| |||||||||||||| || ||||| || | Sbjct 8003365 GCGACACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 8003306 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || || || | |||||| ||||||||| | |||||| || ||| | || ||||||| Sbjct 8003305 AGCAGCGCCTGACATTTGCGGGCAAACAGCTGGAGGATGGCCACACTCTTTCGGATTACA 8003246 Query 22397 ACATTCAAAAAGAATCCACC 22416 |||| || ||||| |||||| Sbjct 8003245 ACATCCAGAAAGAGTCCACC 8003226 >seq1 Length=114275543 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| | || || ||||| ||||||||||||| ||| || Sbjct 8597491 AAGATGCAGATTTTCGTAAAAACCCTTACAGGAAAAACTATCACTCTTGAAGTTGAACCC 8597550 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || ||||| || ||||| || ||| Sbjct 8597551 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 8597610 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||| || |||| ||| || || | || || ||| Sbjct 8597611 CAGCAAAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGTACTTTGTCTGACTAC 8597670 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 8597671 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGT 8597721 >seq3398 Length=72247402 Score = 114 bits (126), Expect = 1e-20 Identities = 146/200 (73%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | ||| | || || |||| ||||| | || ||| Sbjct 17329925 AGATGCAGATCTTTGTGAAGACCCTGACCAGGAAGACCATCACCCTTGAGGCTGAGCCCA 17329984 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| | || ||||| ||||| |||||||||||||| || ||||| || | Sbjct 17329985 GAGACACCAGCCAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 17330044 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 || ||||| || ||||| ||||||||| | |||||| |||||| | || ||||||| Sbjct 17330045 CGCAGCGTCTGAT-TTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCTGATTACA 17330103 Query 22397 ACATTCAAAAAGAATCCACC 22416 ||||||| |||| ||| || Sbjct 17330104 ACATTCAGAAAGGGTCCCCC 17330123 >seq1582 Length=98468360 Score = 111 bits (122), Expect = 1e-19 Identities = 147/200 (74%), Gaps = 3/200 (2%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| ||||| || || | | || || || || |||| ||||| || | ||| Sbjct 98015843 AGATGCAGATTTT-GTGAAGTCCCTGACGGGCAAGACCATCACCCTTGAGGTCCAC-CCA 98015900 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || ||| | || || ||||| ||||| ||||| |||||||| | |||| || | Sbjct 98015901 GTGACACCATCGAGAATGTCAAAGTCAAAATCCAAGATAAGGAGGGCAC-CCACTTGACC 98015959 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| |||||||| ||||||||| | |||||| |||||| | ||| |||||| Sbjct 98015960 AGCAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCCAATTACA 98016019 Query 22397 ACATTCAAAAAGAATCCACC 22416 ||||||| || || |||||| Sbjct 98016020 ACATTCAGAAGGAGTCCACC 98016039 >seq2763 Length=65901067 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| || ||||| || || || || || |||| || || ||| || | Sbjct 824456 GATGCAGATTTTCGTAAAAACCCGTACAGGAAAGACTATCCCTCTCGAGGTTGAACCCTC 824397 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | || || || || || ||||| || ||||| || ||||| Sbjct 824396 GGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 824337 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | || || ||||| ||||| || |||| ||| || || | || || ||||| Sbjct 824336 GCAAAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGTACTTTGTCTGACTACAA 824277 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 824276 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGT 824228 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 22198 TAGTTTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTC 22257 || ||||| || | || || |||||||| ||||| || || | ||||| || || || Sbjct 60922458 TACTTTTAAAC-TAGGTCAAAATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATC 60922516 Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317 || | || ||||| ||| || ||| | || || | || || || || || ||| Sbjct 60922517 ACCTTGGAGGTGGAGCCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAG 60922576 Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377 || || || || || || || || | || || ||||||||||| ||| | || ||| | Sbjct 60922577 GAAGGGATCCCTCCTGACCAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGC 60922636 Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||||| | || || |||||||| || ||||| || ||| Sbjct 60922637 CGCACTCTTTCTGACTACAACATCCAGAAAGAGTCGACC 60922675 >seq1989 Length=108143057 Score = 91.5 bits (100), Expect = 1e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 22302 AAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAA 22361 ||| || ||||||||||| || || || || ||||| || | || || ||||| || || Sbjct 8822766 AAAGATCCAAGACAAGGAAGGCATCCCCCCTGATCAGCAGAGGCTGATCTTTGCTGGGAA 8822825 Query 22362 ACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACA 22421 ||| | || | | |||||| |||| || |||||||| || ||||| |||||| | || Sbjct 8822826 GCAGCTGGAAGGTGGACGCACCCTCTCTGACTACAACATCCAGAAAGAGTCCACCTTGCA 8822885 Query 22422 TTTAGTTTTGCGATTGCGCGGAGGT 22446 || || |||| ||| | |||||| Sbjct 8822886 CTTGGTCCTGCGCTTGAGGGGAGGT 8822910 >seq233 Length=141296404 Score = 86.0 bits (94), Expect = 5e-12 Identities = 153/223 (69%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| | || || || || ||||||| || || ||| || Sbjct 109921895 AAGATGCAGATTTTCGTAAAAACCCTTACAGGAAAGACTATCACTCTGGAGGTCGAACCC 109921836 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATT----CAAGACAAGGAGGGTATTCCACC 22331 | ||||| | || || | || || || || || || || || ||||| || Sbjct 109921835 TCGGATACAATAGAAAATGTAAAGGCCAAGATAAGGCCAGGATAAAGAAGGAATTCCTCC 109921776 Query 22332 CGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGA 22391 ||||| ||| | || || ||||| ||||| || |||| ||| || || | || || Sbjct 109921775 TGATCAGCAAAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGTACTTTGTCTGA 109921716 Query 22392 TTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 ||||||||||| || || ||||| | ||| | || ||| || Sbjct 109921715 CTACAACATTCAGAAGGAGTCCACTCTTCATCTTGTGTTGAGA 109921673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419688723690070