Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3640 132 3e-26 seq520 132 3e-26 seq1230 123 2e-23 seq3641 118 7e-22 seq4347 111 1e-19 seq2763 107 1e-18 seq3398 98.7 6e-16 seq3972 96.9 2e-15 seq1582 86.0 4e-12 seq1989 84.2 1e-11 >seq3640 Length=31815103 Score = 132 bits (146), Expect = 3e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || |||||||| | ||| |||||||| ||||| ||||| || Sbjct 21636582 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 21636523 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | ||| |||| |||||||| || |||||||| || || | ||||| || | || Sbjct 21636522 AGGGTGCGTCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 21636463 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || |||||||| ||||| ||||| || || || | || | || ||| | Sbjct 21636462 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGAC--ATTCTCAATGGTGTCGCTGGGCTCCA 21636405 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||| ||| ||||| || || || || |||||||||||||||||||| Sbjct 21636404 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 21636356 >seq520 Length=73916538 Score = 132 bits (146), Expect = 3e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || |||||||| || ||| |||||||| ||||| ||||| || Sbjct 72484097 CCTCCCCTCAAGCGCAGGACCAAGTGCATGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 72484156 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||||||| || || ||||| || || | ||| | || | || Sbjct 72484157 AGGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCGGATCAGGGGGA 72484216 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || |||||||| ||||| ||||| || || || | |||| || ||||| Sbjct 72484217 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGAC--ATTCTCAATGGTATCACTGGGCTCAA 72484274 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | |||| ||| ||||| || || || || |||||||||||||||||||| Sbjct 72484275 CCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 72484323 >seq1230 Length=159902609 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| || |||||||| | || |||| ||| Sbjct 130889218 ACCAGGTGCAGGGTGGCCTCTTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCC 130889159 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || |||||||| || | |||||||| | || | ||||||||||| Sbjct 130889158 AGCTGTTTGCCCGCAAATATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 130889099 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | |||| || || || || | ||| ||||| | Sbjct 130889098 ATTTTGGCTTTGAC--ATTCTTGATGGTGTCACTGGGCTTGACCTCAAGGGTGATGGTCT 130889041 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || |||||||||||||||||||| Sbjct 130889040 TCCCCGTCAGGGTCTTCACAAAGATCTGCAT 130889010 >seq3641 Length=30143674 Score = 118 bits (130), Expect = 7e-22 Identities = 154/210 (73%), Gaps = 6/210 (3%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| || |||||||| | || |||| ||| Sbjct 24919884 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCC 24919825 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || ||||||| || || |||||||| | || | ||||||||||| Sbjct 24919824 AGCTGTTTGCCCCCAAATATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 24919765 Query 34893 ATCTTCTGTTTGACGGATGCT-ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| || || || | |||| || ||| || || | ||| |||| | Sbjct 24919764 ATTTTGGCTTTGAC--ATTCTCATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG---T 24919710 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| || |||||||||||||||||||| Sbjct 24919709 CCCCGTCAGGGTCTTCACAAAGATCTGCAT 24919680 >seq4347 Length=47401472 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||| |||| || |||||||| | ||| |||||||| ||||| ||||| || Sbjct 19988517 CCTCCCTTCAAGTGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 19988576 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | | |||| | |||||| || | ||||| || || | ||||| || | || Sbjct 19988577 AGGGTGCATCCATCTTACAGCTGCTTCCTAGCAAAGATCAGCCTCTGCTGATCAGGGGGT 19988636 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | || |||||||| ||||| ||||| || || || | |||| || ||||| Sbjct 19988637 ATACCTTCCTTGTCTTCGATCTTTGCCTTGAC--ATTCTCAATGGTGTCACTGGGCTCAA 19988694 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | | || ||| ||||| || || || || |||||||||||||||||||| Sbjct 19988695 CCTTGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 19988743 >seq2763 Length=65901067 Score = 107 bits (118), Expect = 1e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || ||||||| | || |||| ||| | || |||||||| ||||| ||||| ||| Sbjct 60922704 CCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 60922645 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | || |||| |||||||| || |||||||| || || | |||||||| | || Sbjct 60922644 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGAGGG 60922585 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | ||| ||||| || ||||| || || || || || | |||| || ||| | Sbjct 60922584 ATCCCTTCCTTATCCTGGATCTTGGCCTTCAC--ATTCTCGATGGTGTCACTGGGCTCCA 60922527 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | || | ||| ||||| || || || || |||||||||||||| ||||| || Sbjct 60922526 CCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATTTGCATTTT 60922475 Score = 105 bits (116), Expect = 4e-18 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||||| ||||| | || |||| |||||||| || || ||||| Sbjct 60922896 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 60922837 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | |||||||| | || | ||| ||||| || ||||| || || || Sbjct 60922836 ATGAGCCTCTGCTGGTCAGGAGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCAC--AT 60922779 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | |||| || ||| || || | ||| ||||| || || || || ||||||| Sbjct 60922778 TCTCGATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCA 60922719 Query 34969 CAAAGATCTGCATA 34982 |||||||||||||| Sbjct 60922718 CAAAGATCTGCATA 60922705 >seq3398 Length=72247402 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/192 (72%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 34792 CTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATA 34851 ||||||||||||| || || ||||| | || |||| ||||||||||| || ||||| | Sbjct 17330115 CTTTCTGAATGTTGTAATCAGAAAGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAA-A 17330057 Query 34852 TTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATG 34911 | || || ||| |||| | || | ||||||||||| || || |||||| || Sbjct 17330056 TCAGACGCTGCGGGTCAGGTGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC--ATT 17329999 Query 34912 CT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 || | | || | || |||| | || | ||| ||||| || | || || |||||||| Sbjct 17329998 CTGGCTGGTGTCTCTGGGCTCAGCCTCAAGGGTGATGGTCTTCCTGGTCAGGGTCTTCAC 17329939 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 17329938 AAAGATCTGCAT 17329927 >seq3972 Length=29216678 Score = 96.9 bits (106), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| || |||||||| | | |||| ||| Sbjct 8003215 ACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCCGAAAGAGTGTGGCCATCCTCC 8003274 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || |||||| | || || |||||||| | || | ||||||||||| Sbjct 8003275 AGCTGTTTGCCCGCAAATGTCAGGCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 8003334 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | || | || ||| || || | || |||| | Sbjct 8003335 ATTTTGGCTTTGAC--ATTCTCGATGGTGTCGCTGGGCTCGACCTCAAGGGCGATGG-TC 8003391 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| | |||||| ||||||||||||| Sbjct 8003392 TCCCCGTCAAGGTCTTCGCAAAGATCTGCAT 8003422 >seq1582 Length=98468360 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| || ||||||||||| || | ||||| | || |||| ||| Sbjct 98016050 ACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATTGGAAAGAGTGCGGCCATCCTCC 98015991 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || |||||||| || || |||||||| | || |||||||| || Sbjct 98015990 AGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAAGTGG-GTGCCCTCCTTATCTTGG 98015932 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | |||| || | || || | ||| ||||| | Sbjct 98015931 ATTTTGACTTTGAC--ATTCTCGATGGTGTCACTGG-GTGGACCTCAAGGGTGATGGTCT 98015875 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || | ||||||||| |||||||| Sbjct 98015874 TGCCCGTCAGGGACTTCACAAA-ATCTGCAT 98015845 >seq1989 Length=108143057 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || |||||||| | ||| |||||||| ||||| ||||| || Sbjct 8822909 CCTCCCCTCAAGCGCAGGACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 8822850 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | ||| || | |||||||| || || ||||| || || | ||||| || | || Sbjct 8822849 AGGGTGCGTCCACCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCTGATCAGGGGGG 8822790 Query 34875 ACCCCCTCCTTGTC 34888 | || |||||||| Sbjct 8822789 ATGCCTTCCTTGTC 8822776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324603222207984