Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4546 179 3e-39 seq234 174 1e-37 seq1 161 8e-34 seq946 159 3e-33 seq3641 150 1e-30 seq2763 132 4e-25 seq233 125 6e-23 seq702 122 7e-22 seq1789 120 2e-21 seq1582 105 5e-17 seq1230 87.8 1e-11 seq520 86.0 5e-11 >seq4546 Length=144923918 Score = 179 bits (198), Expect = 3e-39 Identities = 370/539 (69%), Gaps = 16/539 (3%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || ||||| || |||||| ||||| | || |||| || | || Sbjct 54495107 GGTATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAGATAGAG 54495048 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||||||| |||||| || ||| |||| ||| || || || | || || || || Sbjct 54495047 ATAATTGCCACTGATCAGGGAAACCGAACCACTACAAGCTACATTGCCTTTACTGATACC 54494988 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTA 550175 |||| || | |||||||| || |||||| || || |||| ||||| || Sbjct 54494987 GAACGATTGATCGGTGATGCTATGAAGAATCAAGTTGCAATG--AATCGCACCAACACGG 54494930 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||| ||||| ||| || | |||||| | || ||| ||||| | ||| ||| | |||| Sbjct 54494929 TTTTCGATGCCAAATGTCTGATTGGATGCAGATTTGATGATGCTGTTGTCCAGTCTGATA 54494870 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 |||||||||||| ||| |||| ||| | | | | || | | ||| || Sbjct 54494869 TGAAGCATTGGCTCTTCATGGTTGTGAATAATGCAGACAGGCCCAAGGTCCAAG-TAGAA 54494811 Query 550296 ATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 |||| || ||| | ||| | || || | | |||||||||||| | | || Sbjct 54494810 TAAAAGGGAGTGACAAAAAGTTTCTATCCCGAGGAGGTGTCATCTATGGTTCTGACAAAG 54494751 Query 550355 ATGAAACAAA-CAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTG 550412 ||||| ||| || | || | | |||| |||| ||||| ||||| | | || | Sbjct 54494750 ATGAAGGAAATCAAGGAA-GCCTATCTTGGA-AAGACTGTTACAGATGCTATGGTCACAG 54494693 Query 550413 TACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTG 550472 | ||||| || ||||||||||| || ||| ||| |||||||||||| |||||||| Sbjct 54494692 TCCCAGCTTACTTTAATGACTCTCACCGT-----TACCAAAGATGCTGGAACTATTGCTG 54494638 Query 550473 GACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 | || ||||||||| | ||||| |||||||| ||||||||||| |||| ||| ||||| Sbjct 54494637 GTCTCAATGTTCTTAGGATTATAAATGAACCCACTGCTGCTGCTATTGCTTAT-GACTT 54494580 Score = 147 bits (162), Expect = 2e-29 Identities = 336/495 (68%), Gaps = 18/495 (4%) Strand=Plus/Minus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT---- 552169 ||||| ||||| || |||||||| ||||| | || || || ||| ||| ||| Sbjct 54494127 CATGACATTGTCCTGGTTGGTGGTTCTACCTGCATCCCCAAGTTTC---AAAAGTTTTTG 54494071 Query 552170 -AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTT-AATCCAGATGAGGCTGTT 552227 ||| ||| || |||||| ||| || | ||| | ||| | || || |||||||| ||| Sbjct 54494070 CAAGA-CTTCTT-CAATGGAAAAGAACTGAATAAGAGTTATCAACCCTGATGAGGCCGTT 54494013 Query 552228 GCCTATGGTGCCGCAATTCAAGCAGCT-ATTCTTTCTGGA--CAAA-CTGATGAAAAACT 552283 || |||||||| || | || ||| | || || |||||| |||| |||| ||| | | Sbjct 54494012 GCTTATGGTGCAGCTGTCCAGGCACCCCATCCTGTCTGGAGACAAATCTGA-GAACA--T 54493956 Query 552284 ACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGG 552343 |||||| | ||||| | ||||| |||||||| |||||||| || |||| | ||| || Sbjct 54493955 TCAAAATTTGCTACTTCTGGATGTCACTCCTCTTTCTCTTGGATTTAAAACTGCTGGTGG 54493896 Query 552344 TATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATT 552403 |||||||| || || | | ||||||||||||||| || | | | || Sbjct 54493895 AGTTATGACTGTACTCATTAAGCGCAATACTACTATTCCTACAAAGCAGACACAGACCTT 54493836 Query 552404 TTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAA 552463 |||| || || || || || ||| ||| |||| ||| ||||| || | Sbjct 54493835 CACTACCTACTCTGACAACCAGCCTGGTGTGCTCATTCGGGTTTACGAAGGTGATCGTGC 54493776 Query 552464 ATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCC 552523 | ||||| ||||| || ||||| | ||| | | ||| | |||||||| || Sbjct 54493775 TATGACTAAGGATAACAACTTGCTTGGCAAGTTTCAACTCATAGGCGTACCTCCTGCCCC 54493716 Query 552524 TCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 | || || || || |||||||| |||| ||||| ||| ||||||| ||| | ||||| Sbjct 54493715 CTGGGGTGTTCCTCAGATTGAAGTCCCTTTTGATATTGATACCAATGGCATTCTCAATGT 54493656 Query 552584 GACTGCTTGTGATAA 552598 ||||| ||||| Sbjct 54493655 CTCTGCTGTGGATAA 54493641 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/158 (74%), Gaps = 4/158 (3%) Strand=Plus/Minus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| ||||| || || |||||||| ||||||||||| ||| ||||||||||||| || Sbjct 25086951 ATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAAGAGGAATTCCTTCCTT 25086892 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAGAGTA 563436 ||| || || || ||||| || | |||||| || | || || |||||||| Sbjct 25086891 ATCCTGGATCTTGGTCTTTACATTTTCTAATGTATC--TGAGGGTTCAACCTCGAGAGTC 25086834 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || |||| ||| | | |||||| ||||| Sbjct 25086833 ATGGTCTTCCCCATAAGGGTTATTATGAAAATCTGCAT 25086796 >seq234 Length=119751181 Score = 174 bits (192), Expect = 1e-37 Identities = 467/703 (66%), Gaps = 12/703 (2%) Strand=Plus/Plus Query 551894 AGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTAC 551953 |||| | || || || | |||||||| ||| | || | || || | || || | || Sbjct 116332674 AGCTGTCCGACGCCTCCGTACTGCTTGTGAACGTGCTGAGCGTGCCCCGTCTTCCAGCAC 116332733 Query 551954 TCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTC 552013 || ||| |||||| | || ||| | | || |||||||| | |||| | ||| | Sbjct 116332734 CCAGGCCAGTATTGAGATTGAGTCACTTTACGAAGGAATTGACTTCTATACCTCCATTAC 116332793 Query 552014 GAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGA 552073 | ||| ||||||||| | | ||||||| || | || | || || ||||| Sbjct 116332794 CCGTGCCCGATTTGAAGAATTGAATGCTGATCTGTTCCGTGGCACTCTGGACCCTGTAGA 116332853 Query 552074 ACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGG 552133 ||| | ||||| | || | || || || | | ||||| ||||| || ||||| Sbjct 116332854 GAAAGCCCTTCGAGATGCCAAACTAGACAAGTCACAGATTCATGACATTGTCCTGGTTGG 116332913 Query 552134 TGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAA 552191 ||| ||||| | || || || |||| | | || ||| ||| || |||||| ||| Sbjct 116332914 TGGTTCTACCCGCATCCCCAAGATTCAAAAGCTTTTGCAAGA-CTTCTT-CAATGGAAAA 116332971 Query 552192 AAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCA 552251 || | ||| | ||| | || || |||||||| ||||| |||||||| || | || || Sbjct 116332972 GAACTGAATAAGAGTATCAACCCTGATGAGGCCGTTGCTTATGGTGCAGCTCTCCAGGCG 116333031 Query 552252 GCTATTCTTTCTGGA--CAAA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTT 552308 || || || |||||| |||| |||| ||| | | ||| || | ||| | ||||| Sbjct 116333032 GCCATCCTGTCTGGAGACAAATCTGA-GAACA--TTCAAGATTTGCAACTCCTGGATGTC 116333088 Query 552309 ACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGA 552368 |||||||| ||||||||| | ||||| | ||| || |||||||| || || | | Sbjct 116333089 ACTCCTCTTTCTCTTGGTATTGAAACCGCTGGTGGAGTTATGACTGTACTCATTAAGTGC 116333148 Query 552369 AATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACT 552428 ||||||||||||||| || | | | | |||| || || || || || || Sbjct 116333149 AATACTACTATTCCTCCAAAGCAGACACAGACCTGCACTACCTACTCTGACAACCAGCCT 116333208 Query 552429 GCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT 552488 | || ||||| ||| ||||| ||| | | ||||| ||||| || |||| Sbjct 116333209 GGTGAGCTCATTCAGGTTTACGAAGGTGAACGTGTCATGACTAAGGATAACAACTTACTT 116333268 Query 552489 GG-TACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGT 552547 || | ||| || | | || | || |||||||| || | || || || |||||||| Sbjct 116333269 GGCAAGTTTGAACTCACAA-GCATACCTCCTGCCCCCTGGGGTGTTCCTTGGATTGAAGT 116333327 Query 552548 TACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 ||||| ||||| ||||| ||||| ||| | ||||| ||||| Sbjct 116333328 CACTTTTGATATTGATGCTAATGGCATTCTCAATGTCTCTGCT 116333370 Score = 140 bits (154), Expect = 3e-27 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||| || | || || ||||| || ||||||||||| || | ||| ||||| Sbjct 116332315 GTTACCGATGCTGTGGTCACAGTCCCAGCTTACTTTAATGACTCTCAGCATCAGGCTACC 116332374 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| |||||||| || ||||||||| | ||||| |||||||| |||||| Sbjct 116332375 AAAGATGCTGGAACCATTGCTGGTCTCAATGTTCTTAGGATTATAAATGAACCCACTGCT 116332434 Query 550511 GCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTT 550570 ||||| |||| ||||| | || ||| | || |||| | ||||| || |||||| Sbjct 116332435 GCTGCTATTGCTTATGGCTTAGACAAAAAGGTTGGAGCAGAAATAAATGTGCTGATCTTT 116332494 Query 550571 GA 550572 || Sbjct 116332495 GA 116332496 >seq1 Length=114275543 Score = 161 bits (178), Expect = 8e-34 Identities = 329/483 (68%), Gaps = 13/483 (3%) Strand=Plus/Minus Query 552114 CATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AA 552171 ||||| ||||| || ||| |||| ||||| | || || || |||| | | || || Sbjct 47417168 CATGACATTGTCCT-GTTAGTGGTTCTACCTGCATCCCCAAGATTCAAAACCTTTTGCAA 47417110 Query 552172 GTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCT 552231 | ||| || |||||| ||| || | ||| | ||| | || || |||||| | ||||| | Sbjct 47417109 GA-CTTCTT-CAATGGAAAAGAACTGAATAAGAGTATCAACCCTGATGAGACCGTTGCTT 47417052 Query 552232 ATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATA 552291 ||||||| || | || | || || || |||| | | | ||| || | ||| || Sbjct 47417051 ATGGTGCAGCTGTCCAGGTGGCCATCCTGTCTGTATACAAATCTGAGAACGTTCAAGATT 47416992 Query 552292 TTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGA 552351 | | || | ||| | |||||||| ||||||||| | ||||| | ||| || ||||| Sbjct 47416991 TGCTTCTCCTGGATATCACTCCTCTTTCTCTTGGTATTGAAACCGCTGGTGGAGGTATGA 47416932 Query 552352 CTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTA----TTTTCT 552407 || || || | | ||||||||||||||| | ||| | || || || Sbjct 47416931 CTGTACTCATTAAGTGCAATACTACTATTCCT----ACAAAGCAGACATAGACCTTCACT 47416876 Query 552408 ACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTC 552467 || || || || || || ||| ||| ||||| ||| ||||| ||| | | Sbjct 47416875 ACCTACTCTGACAACCAGCCTGGTGTGCTCATTCAGGTTTACGAAGGTGAACGTGCCATG 47416816 Query 552468 ACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGT 552527 ||||||||||| || |||||| | ||| | | ||| || |||||||| ||||| Sbjct 47416815 ACTAAAGATAACAACTTACTTGGCAAGTTTGAACTCACAGGCATACCTCCTGCCCCTCGA 47416756 Query 552528 GGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACT 552587 || || || ||||||||||| ||||| ||||| ||||||||||| ||| | ||||| || Sbjct 47416755 GGTGTTCCTCAAATTGAAGTCACTTTTGATATTGATGCCAATGGCATTCTCAATGTCTCT 47416696 Query 552588 GCT 552590 ||| Sbjct 47416695 GCT 47416693 Score = 159 bits (176), Expect = 3e-33 Identities = 361/534 (68%), Gaps = 9/534 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | |||||||| | ||||| ||||| | || |||| ||||| || Sbjct 18082861 GGTATTGATCTTGGAACCACCTGCTCCTGTGTGGGTGTCTTTCAGCATGGAAAAGTAGAG 18082920 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || ||| |||| ||||| || ||| |||| ||||| |||||| |||| || | || Sbjct 18082921 ATAATTCCCAACGATCAGGGAAACTGAACCTCTCCAAGCTATGTTGCTTTTACTAATACC 18082980 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 ||| || | |||||||| | || |||||| ||| || || || ||||| || Sbjct 18082981 GAATGATTGATAGGTGATGCTGTGAATAATCAAGTTCCAATG--AACCCCACCAACACAG 18083038 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 ||||||| || |||| | | |||| | | || ||| | ||| | ||| ||| | ||| Sbjct 18083039 TTTTTGACGCCAAACATCTGATTGAATGCAGATTTGAGGATGCTGTTGTCCAGTCTGATG 18083098 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 ||||| ||||||| ||| | || || | | || || | | ||| || Sbjct 18083099 TGAAGGATTGGCCCTTCATGGTGGTGAACAATGCAGGCAAGTGCAAGGTCCAAG-TAGAA 18083157 Query 550296 ATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 |||| | | || | ||| | ||||| | | || |||||||| | | || Sbjct 18083158 TACAAGGGAGAGATGAAAAGTTTCTATCCAGAGGAGGTGTCGTCTATGGTCTGACA-AAG 18083216 Query 550355 ATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGT 550413 ||||| ||| || || | | |||| |||| ||||| |||| || | || | Sbjct 18083217 ATGAAGAAAATTGCAGAAGCCTGTTTTGGA-AAGACTGTTACCAATGCTGTGGTCACAAT 18083275 Query 550414 ACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 ||||| | ||||||||||| || | ||| ||||| |||||||||||| |||||||| Sbjct 18083276 GCCAGCTTGCTTTAATGACTCTCAGCATCAGGCTACCAAAGATGCTGGAACCATTGCTGG 18083335 Query 550474 ACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || ||||||||| | ||||| ||||| || ||||||||||| |||| ||||| Sbjct 18083336 TCTCAATGTTCTTAGGATTATAAATGAGCCAACTGCTGCTGCTATTGCTTATGG 18083389 Score = 145 bits (160), Expect = 6e-29 Identities = 160/211 (76%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 8597702 ACAAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 8597645 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || |||||||| ||||||||||||||||||||||||||||| ||||| | Sbjct 8597644 CTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCT 8597585 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | | ||| ||||| | ||||| Sbjct 8597584 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACTTCAAGAGTGATAGTTT 8597525 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || ||||| ||||| |||||||| ||||| Sbjct 8597524 TTCCTGTAAGGGTTTTTACGAAAATCTGCAT 8597494 >seq946 Length=123392446 Score = 159 bits (176), Expect = 3e-33 Identities = 370/551 (67%), Gaps = 10/551 (2%) Strand=Plus/Minus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 || ||||| || ||| |||| ||||| || ||||| || || | || | || || Sbjct 1732758 GCCATAGGCATCGATCTAGGCACCACCTACTCGTGTGTGGGGGTGTTCCAGCACGGCAAG 1732699 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || || || || ||||| || || || ||| | || || || || || | |||||| Sbjct 1732698 GTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCTACGTGGCCTTCACG 1732639 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAATCCTACC 550168 || || ||| | |||| ||||| || || | || ||||| || ||||| Sbjct 1732638 GACACCGAAAGGCTCATTGGAGATGCCGCCAAGAACCAGGTAGCCA-TG--AATCCCCAG 1732582 Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || ||| | |||||||| |||||| | ||||| || | ||||||||| | ||| || Sbjct 1732581 AACACTGTCTTTGATGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTTGTGCAA 1732522 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATAT--TG 550286 | |||||||| | ||||||||| ||| | | |||| || ||||| | | || Sbjct 1732521 TCTGATATGAAACTTTGGCCTTTTCAAGTGATCAATGAAGGAGGCAAACCCAAGGTGCTG 1732462 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTT 550346 | | || | |||| |||| || | || || |||| || || ||||| Sbjct 1732461 GTG-TCCT-ACAAAGGGGAGAATAAAGCTTTCTACCCTGAGGAAATCTCTTCAATGGTAC 1732404 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAA 550406 | | || ||||| | || || |||||| | || || || ||| |||| || | Sbjct 1732403 TGACTAAGATGAAGGAGACTGCTGAGGCTTTTTTGGGACATCCTGTCACGAATGCTGTGA 1732344 Query 550407 TAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTA 550466 | || || ||||| ||||| |||||||| ||||| || ||||| || ||||| || | Sbjct 1732343 TCACAGTGCCAGCCTATTTCAATGACTCTCAACGCCAGGCTACAAAGGATGCAGGTGTGA 1732284 Query 550467 TTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATG 550526 |||| ||||| ||||| || | || ||||||||||| || |||||||| |||| |||| Sbjct 1732283 TTGCAGGACTCAATGTGCTAAGAATCATCAATGAACCCACAGCTGCTGCCATTGCCTATG 1732224 Query 550527 GACTTGATAAA 550537 | | |||||| Sbjct 1732223 GTTTAGATAAA 1732213 >seq3641 Length=30143674 Score = 150 bits (166), Expect = 1e-30 Identities = 332/490 (68%), Gaps = 12/490 (2%) Strand=Plus/Plus Query 550044 ATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTT 550103 |||| || || || | |||||| ||||| | || ||| |||| |||||| |||||| Sbjct 8009352 ATGGAAAGGTAGAGCTAATTGCCGATGATTAGGGAAACCGAACCACTCCAAGCTATGTTG 8009411 Query 550104 CTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAA 550161 | || || || || ||| || |||||||||| | || |||||| || || || Sbjct 8009412 CCTTTACTGATACCAAACGATTGATTGGTGATGCTGTGAAGAATCAAGTTGCAATG--AA 8009469 Query 550162 TCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGAC 550221 | | ||||| | |||||||||| || || | || ||| | || ||| ||| | | Sbjct 8009470 TACCACCAACATGGTTTTTGATGCCGAATGTCTGATCGGATGCAGATTTGATGCTGCTGT 8009529 Query 550222 TGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA 550281 ||| ||| | ||||||||||| ||||| || | || ||| | | || | || | Sbjct 8009530 TGTCCAGCCTGATATGAAGCACTGGCCCTTTGTGGTGGTGGATGATGCAGGCAGGCCCAA 8009589 Query 550282 TATTGAAGCT--ACTCATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATC 550338 | ||| | || || || | ||| | ||| || || || | | ||||| Sbjct 8009590 GGTCCAAGTAGAATACAAGAGAGA---GACAAAAAGTTTCCATCCCGAGGAGGTGTCATC 8009646 Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGG 550397 ||||||| | | || |||| ||| || || | | |||| |||| ||||| Sbjct 8009647 TATGGTTCTGACTAAGGTGAAGGAAATCGCAGAAGCCTATCTTGGA-AAGACTGTTACCA 8009705 Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || | || | ||||| || ||||||||||| || ||||| | ||| ||||||| Sbjct 8009706 ATGCTGTGGTCACAGGCCCAGCTTACTTTAATGACTCTCAGCGTCAGGGTACCAAAGATG 8009765 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 ||||| ||||||||| || |||||||| | | ||| |||||||| |||||||||| Sbjct 8009766 CTGGAACTATTGCTGGTCTCCATGTTCTTAGGACTATAAATGAACCCACTGCTGCTGGTA 8009825 Query 550518 TTGCATATGG 550527 |||| ||||| Sbjct 8009826 TTGCTTATGG 8009835 >seq2763 Length=65901067 Score = 132 bits (146), Expect = 4e-25 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 824247 ACAAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 824304 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || |||||||| ||||||||||||||||||||||||||||| ||||| | Sbjct 824305 CTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCT 824364 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | | ||||||| | ||| | Sbjct 824365 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGGGATAGTCT 824424 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || ||| | ||||| |||||||| ||||| Sbjct 824425 TTCCTGTACGGGTTTTTACGAAAATCTGCAT 824455 >seq233 Length=141296404 Score = 125 bits (138), Expect = 6e-23 Identities = 159/213 (75%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 ||||||||||| || ||| |||| ||| | || |||| | ||| | | ||||| Sbjct 108315091 ACAAGATGAAGAGTGGACTGCTTTTG--AATGGTATAGTCAGACAAAGTACGTCCATCTT 108315034 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || |||||||| |||||||||||||| |||||||||||||| ||||| | Sbjct 108315033 CTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGAGGAATTCCTTCCTTATCCT 108314974 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTAACAGT 563441 | || || ||||| || |||||||| || || | || |||||||| | ||| Sbjct 108314973 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCG-AC-CTCGAGAGTGATAGT 108314916 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| ||||| |||||||| ||||| Sbjct 108314915 CTTTCCTGTAAGGGTTTTTACGAAAATCTGCAT 108314883 Score = 125 bits (138), Expect = 6e-23 Identities = 159/215 (74%), Gaps = 8/215 (4%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 ||||||||||| || || || ||| ||||| |||| | ||| | | |||||| Sbjct 109921680 ACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCT 109921739 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG- 563384 ||||| || || |||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 109921740 AGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGG 109921799 Query 563385 ---AATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTAACA 563439 || || ||||| || |||||||| || || | || || ||||| | | Sbjct 109921800 CCTTATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCG-AC-CTCCAGAGTGATA 109921857 Query 563440 GTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || ||||| ||||| |||||||| ||||| Sbjct 109921858 GTCTTTCCTGTAAGGGTTTTTACGAAAATCTGCAT 109921892 >seq702 Length=116768492 Score = 122 bits (134), Expect = 7e-22 Identities = 115/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| || | || || ||||| || || || ||||| || ||||| ||||| Sbjct 103730517 GTTACCAATGCTGTGGTCACAGTCCCAGCTTACTTCAACGACTCTCAGCGTCAGGCTACC 103730458 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| |||||||| || ||||||||| | ||||| |||||||| || ||| Sbjct 103730457 AAAGATGCTGGAACCATTGCTGGTCTCAATGTTCTTAGGATTATAAATGAACCCACCGCT 103730398 Query 550511 GCTGCACTTGCATATGGACTTGATAAA 550537 ||||| |||| ||||| | |||||| Sbjct 103730397 GCTGCTATTGCTTATGGCTTAGATAAA 103730371 Score = 96.9 bits (106), Expect = 3e-14 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 ||||| ||| | || ||||| || |||||| ||||| | || |||| || || || Sbjct 103731558 GGTATTGATCTTGGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGGAAAGGTAGAG 103731499 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| |||||| || ||| | || || || || Sbjct 103731498 ATAATTGCCAATGATCAGGGAAACCGAACCACTCCAAGCTACGTTGCCTTTACTGACACC 103731439 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAG--CCACTGGTAATCCTACCAATACTA 550175 |||| || | |||||||| || || |||||| || || ||||| ||||| || Sbjct 103731438 GAACGATTGATCGGTGATGCTGCGAAGAATCAAGTTGCAATG--AATCCCACCAACACGG 103731381 Query 550176 TTTTTGATG 550184 |||||| || Sbjct 103731380 TTTTTGGTG 103731372 Score = 91.5 bits (100), Expect = 1e-12 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 552468 ACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGT 552527 ||||| ||||| || |||||| | ||| | | ||| || |||||||||||||| Sbjct 103729044 ACTAAGGATAACAACTTACTTGGCAAGTTTGAACTCACAGGCATACCTCCTGCTCCTCGG 103728985 Query 552528 GGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACT 552587 || || || || |||||||| ||||| ||||| ||||||||||| ||| | ||||| || Sbjct 103728984 GGTGTTCCTCAGATTGAAGTCACTTTTGATATTGATGCCAATGGCATTCTCAATGTCTCT 103728925 Query 552588 GCT 552590 ||| Sbjct 103728924 GCT 103728922 >seq1789 Length=108226025 Score = 120 bits (132), Expect = 2e-21 Identities = 340/512 (66%), Gaps = 13/512 (3%) Strand=Plus/Plus Query 550010 GGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAAT 550069 || ||||| || |||||| ||||| | || ||| ||||| || || ||||||||| Sbjct 55364659 GGCACCACCTACTCTTGTGTGGGTGTCTTCCAGCATGAAAAAGTGGAGATAATTGCCAAT 55364718 Query 550070 GATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTT 550129 ||||| | || | || |||||| || || | || | || ||||||| || || Sbjct 55364719 GATCAGTGAAAACGCACCACTCCAAGCTACATTGCCTTTATTGATACTGAACGATTGATT 55364778 Query 550130 GGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTATTTTTGATGCTA 550187 |||| ||| || || |||||| || || | | | ||||| || |||||||||| | Sbjct 55364779 GGTGTTGCTGCGAAGAATCAAGTTGCAATGA-ACTGC-ACCAACACGGTTTTTGATGCCA 55364836 Query 550188 AACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGC 550247 ||||| | |||||| | || ||| ||||| | ||| ||| | ||||||||||||| || Sbjct 55364837 AACGTCTGATTGGATGCAGATTTGATGATGCTGTTGTCCAGACTGATATGAAGCATTAGC 55364896 Query 550248 CTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG--CTACTCATGAAGGATC 550305 | || | || |||| | || | || | | ||| | || || || Sbjct 55364897 CCTTTGTGGTGGTGAATGAGGCAGGCAGGCCCAAGGTCCAAGTAAAATACAAGAGAGA-- 55364954 Query 550306 TGTTAAACAAT-TTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAA 550364 | ||| | | | | || || | | | |||| || | | | || ||||| ||| Sbjct 55364955 -GACAAAAAGTCTCTATCCTGAGGAGGTGTTTTCTACGG-TCTGACAAAGATGAAGGAAA 55365012 Query 550365 CAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATAT 550423 | | | | | | |||| ||||| | || || | || || ||||| || Sbjct 55365013 TCACATAAACCTATCTCAG-AAAGACGGTTACCAAGGCTGTGGTCACAGTGCCAGCTTAC 55365071 Query 550424 TTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTT 550483 ||||||||||| || | ||| ||||| |||||||||||| | |||||||| || |||||| Sbjct 55365072 TTTAATGACTCTCAGCATCAGGCTACCAAAGATGCTGGAAGCATTGCTGGTCTCAATGTT 55365131 Query 550484 CTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 ||| | ||| | |||||| ||||||||||| Sbjct 55365132 CTTAGGATTGTAAATGAAGTGACTGCTGCTGC 55365163 >seq1582 Length=98468360 Score = 105 bits (116), Expect = 5e-17 Identities = 104/133 (78%), Gaps = 1/133 (1%) Strand=Plus/Minus Query 550372 TGCTTTTGTTGGTCAAGAAG-TTACGGATGCAGTAATAACTGTACCAGCATATTTTAATG 550430 |||||||||| || || |||| ||||||| | ||||||||||| ||||| |||| Sbjct 87577642 TGCTTTTGTTATTCTTTTAGGTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATG 87577583 Query 550431 ACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTA 550490 | | ||||| ||||| || |||||||||||| |||||||||||| |||||| | | | Sbjct 87577582 ATGCCCAACGCCAAGCAACCAAAGATGCTGGAACTATTGCTGGACTGAATGTTATGAGGA 87577523 Query 550491 TTATCAATGAACC 550503 | |||||||| || Sbjct 87577522 TCATCAATGAGCC 87577510 Score = 89.7 bits (98), Expect = 4e-12 Identities = 91/115 (79%), Gaps = 3/115 (3%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTAC-CAGCATATTTTAATGACTCACAACGTC-AAGCTA 550448 ||||| ||||||| | ||||||| |||| ||||| ||||| | ||||| | |||| | Sbjct 87571452 GTTACCCATGCAGTTGTTACTGTACGCAGCCTATTTCAATGATGC-CAACGCCCAAGCAA 87571394 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 | |||||||||||| |||||||||||| |||||| | | || |||||||| || Sbjct 87571393 CCAAAGATGCTGGAACTATTGCTGGACTGAATGTTATGAGGATCATCAATGAGCC 87571339 >seq1230 Length=159902609 Score = 87.8 bits (96), Expect = 1e-11 Identities = 97/127 (76%), Gaps = 7/127 (6%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 |||||||| || || ||| |||| ||| ||||| |||| || | | ||| ||||| Sbjct 126082703 ACAAGATGCAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGATAAACTACTTCCATCTT 126082760 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || ||||||||||| ||||||||||| || ||||||| ||| ||||| | Sbjct 126082761 CCAGTTGCTTGCCGGCAAAAATCAGTCTTTGCTGCTC---AGGAATTTTTTCCTTATCCT 126082817 Query 563384 GAATTTT 563390 |||| || Sbjct 126082818 GAATCTT 126082824 >seq520 Length=73916538 Score = 86.0 bits (94), Expect = 5e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||| ||||| |||| | ||| | | |||||| ||||| || || |||||||| ||||| Sbjct 3177369 AATGTTGTAGTCAGACAAAGTACGTCCATCTTCTAGTTGCTTGCCAGCAAAAATCAGTCT 3177310 Query 563352 TTGCTGATCAGGAGGAATTCCT 563373 |||||||||||||||||||||| Sbjct 3177309 TTGCTGATCAGGAGGAATTCCT 3177288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028889952732220