Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 125 6e-24 seq520 100 2e-16 seq233 100 2e-16 >seq1 Length=114275543 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||| || || || ||||| || ||||| || | | ||| | |||| Sbjct 8597705 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 8597646 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | |||||| || ||||| |||| | || ||||| || ||||| ||||| ||||| Sbjct 8597645 TCTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCC 8597586 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || || |||||| |||||| || || || | ||| ||||||||||||| ||| Sbjct 8597585 TGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACTTCAAGAGTGATAGTT 8597526 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | |||||||| || |||||||| Sbjct 8597525 TTTCCTGTAAGGGTTTTTACGAAAATCTGCAT 8597494 >seq520 Length=73916538 Score = 100 bits (110), Expect = 2e-16 Identities = 164/236 (69%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 101234 TAGACATTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTG 101293 |||||| ||||| || || || | || || || | ||| || ||||| || || ||| Sbjct 72484091 TAGACA---CCTCCCCTCAAGCGCAGGACCAAGTGCATGGTGGACTCTTTCTGGATGTTG 72484147 Query 101294 TAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGA 101353 || || | || || | |||| |||| ||||| || ||||| |||| | ||| || Sbjct 72484148 TAGTCAGAGAGGGTGCGCCCATCTTCCAGCTGCTTCCCAGCAAAGATCAGCCTCTGCGGA 72484207 Query 101354 TCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGAC 101413 || || ||||||||||| || ||||| || ||| || ||| | || | || ||| Sbjct 72484208 TCAGGGGGAATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTATCACTG 72484267 Query 101414 GTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || || || || |||| || |||||||| | || || ||||| |||||||| Sbjct 72484268 GGCTCAACCTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 72484323 >seq233 Length=141296404 Score = 100 bits (110), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||| || || || || || || ||||| || | | ||| | |||| Sbjct 109921677 AACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 109921736 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | |||||| || ||||| |||| | || ||||| || ||||| ||||||||||| Sbjct 109921737 TCTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCC 109921796 Query 101378 TG----AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || |||||| |||||| || || || | ||| || || ||||||| Sbjct 109921797 TGGCCTTATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCCAGAGTGAT 109921856 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | |||||||| || |||||||| Sbjct 109921857 AGTCTTTCCTGTAAGGGTTTTTACGAAAATCTGCAT 109921892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396241318001046