Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq1230 136 5e-27 >seq1230 Length=159902609 Score = 136 bits (150), Expect = 5e-27 Identities = 207/292 (71%), Gaps = 7/292 (2%) Strand=Plus/Plus Query 197022 CAGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGT---T 197078 ||| ||||||||||| ||||| || |||| ||| || |||| | | || || | | Sbjct 143018115 CAGCTCCTCGTCGCTGAAGCCGGTTCCGAGCTTGCATATGG---CCTGCAGCTCCTCACT 143018171 Query 197079 GTCGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCC 197138 ||| | ||| |||| || | ||| | |||||| || | | ||| ||| || Sbjct 143018172 GTCCTTGTCGTACGAGGCCAGCAGGAAGCCCCCGTAGTGGCCGGCCCGCTTCCCCCGGCC 143018231 Query 197139 GTTGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTT 197198 | || | ||||| ||||| || ||||| ||||||| || || || | ||| || || Sbjct 143018232 CAGGTAGGCGCCGATCACCACAAGGTCCAGGGTGTCGCCCAAGCCGTCGAGGTAGTCCTT 143018291 Query 197199 CTTCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAG 197258 |||||| ||||||||| | |||||| |||| ||||||||||| |||| || ||||| Sbjct 143018292 CTTCAGCTTGAGCCAGTTGTGCGATCTCCTGGCGATCTCGTAGGTGGCGTCGACATCCAG 143018351 Query 197259 GGTCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAA 197310 |||||| | ||||| |||||||| || ||||||| | ||||| |||| Sbjct 143018352 GGTCTTCACCATCAGCCCCTCGCAGGAGTCTTTCACGGAC-TGTTCCAGAAA 143018402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676664650876640