Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq946 104 4e-17 >seq946 Length=123392446 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | | |||||||| | || || || || || |||||||| || || ||| Sbjct 38534944 TGGTGGTACTTTGTGTCTAAAGGAGTGGAGTATTTGGACACTGTGTTTTTTATCCTGAGG 38535003 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || ||| || ||| || || || ||||||||||| | |||||||||||| || Sbjct 38535004 AAGAAAAATAACCAAGTTTCTTTCCTTCATGTATATCATCACTGTACTATGTTTACGTTG 38535063 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| ||||||| || || Sbjct 38535064 TGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACA 38535098 Score = 95.1 bits (104), Expect = 2e-14 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 ||||||||||| || ||| ||||||||||||||||||| |||||||| || ||||| Sbjct 38536168 GCATTTTTCGGAGCCCAGATGAATTCTTTTATCCATGTGATTATGTACTCATACTATGGG 38536227 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | | || | ||| | | || |||||||| | ||||||||||| ||||| || || Sbjct 38536228 TTAACTGCATTTGGCCCATGGATTCAAAAGTATCTTTGGTGGAAGCGATACCTGACCATG 38536287 Query 58661 ATGCAATTGGTA 58672 |||| ||||| Sbjct 38536288 TTGCAGCTGGTA 38536299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903324495110080