Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3640 154 1e-32 seq2763 140 3e-28 seq520 132 5e-26 seq4347 114 1e-20 seq3398 114 1e-20 seq3972 107 2e-18 seq3641 107 2e-18 seq1582 89.7 5e-13 seq1 84.2 2e-11 seq233 82.4 7e-11 >seq3640 Length=31815103 Score = 154 bits (170), Expect = 1e-32 Identities = 160/207 (77%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| || ||||| || | ||| | | | || || || Sbjct 21636561 AAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGTCCA-TCTTCCAG 21636503 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || |||| |||||| || |||||||||||||||||||| ||| Sbjct 21636502 CTGCTTCCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGGATGCCTTCCTTGTCTTGGAT 21636443 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| ||||| | ||||| |||||| |||||||||| |||| ||||| ||| ||||| Sbjct 21636442 CTTTGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACCTCGAGGGTGATGGTCTTGCC 21636383 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||||| || || || || |||||||| Sbjct 21636382 GGTCAGGGTCTTCACAAAGATCTGCAT 21636356 >seq2763 Length=65901067 Score = 140 bits (154), Expect = 3e-28 Identities = 152/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 60923131 GGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 60923073 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| |||||||| |||||||| || |||||| || Sbjct 60923072 CTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATCCCTTCCTTATCCTGGATCTTGGCCT 60923013 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| || || |||||||||| || | ||||| ||| ||||||||||| | Sbjct 60923012 TCACATTCTCAATGGTATCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGG 60922953 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 60922952 TCTTGACGAAAATCTGCAT 60922934 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 60922675 GGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 60922617 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| |||||||| |||||||| || |||||| || Sbjct 60922616 CGGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATCCCTTCCTTATCCTGGATCTTGGCCT 60922557 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 60922556 TCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGG 60922497 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || || ||||| Sbjct 60922496 TCTTCACAAAGATTTGCAT 60922478 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 60922903 GGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 60922845 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| |||||||| |||||||| || |||||| || Sbjct 60922844 CTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATCCCTTCCTTATCCTGGATCTTGGCCT 60922785 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | || || |||||||||| || | ||||| ||| ||||||||||| | Sbjct 60922784 TCACATTCTCGATGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 60922725 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || || |||||||| Sbjct 60922724 TCTTCACAAAGATCTGCAT 60922706 >seq520 Length=73916538 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || ||||||||||||||||| || ||||| || | ||| | || || ||| Sbjct 72484118 AAGTGCATGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCTTCCAGC 72484177 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | || |||| |||| | || || || |||||||||||||| |||| Sbjct 72484178 TGCTTCCCAGCAAAGATCAGCCTCTGCGGATCAGGGGGAATGCCTTCCTTGTCTTGGATC 72484237 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||||| | ||||| || || ||||||| || |||| ||||| ||| |||||| Sbjct 72484238 TTTGCCTTGACATTCTCAATGGTATCACTGGGCTCAACCTCGAGGGTGATGGTCTTGCCG 72484297 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || |||||||| Sbjct 72484298 GTCAGGGTCTTCACAAAGATCTGCAT 72484323 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| || ||| | || || |||||||| || Sbjct 72484354 GGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGCTGCTTCCC 72484413 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| |||||| || || ||||||||||||||||| ||||||| ||| Sbjct 72484414 GGCAAAGATCAGCCTCTGCTGATCAGG-GGGATGCCTTCCTTGTCTTGGATCTTTGCCTT 72484472 Query 133583 GAGCTGCTCAA 133593 || | ||||| Sbjct 72484473 GACATTCTCAA 72484483 >seq4347 Length=47401472 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| || ||||| || | ||| | || | ||| Sbjct 19988538 AAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCATCCATCTTACAGC 19988597 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| | || | || |||| |||||| || || || || ||||||||||| |||| Sbjct 19988598 TGCTTCCTAGCAAAGATCAGCCTCTGCTGATCAGGGGGTATACCTTCCTTGTCTTCGATC 19988657 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 ||| ||||| | ||||| ||||| ||||||| || | || ||||| ||| ||||| Sbjct 19988658 TTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTTGAGGGTGATGGTCTTGCCA 19988717 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || || |||||||| Sbjct 19988718 GTCAGGGTCTTCACAAAGATCTGCAT 19988743 >seq3398 Length=72247402 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 1977481 GGTCGACTCGTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA-TCTTCCAGCTGCTTGC 1977423 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| |||||| | |||||||| | |||||| || Sbjct 1977422 CTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGGTCCCTTCCTTACCCTGGATCTTGGCCT 1977363 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 1977362 TCACATTCTCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 1977303 Query 133642 TTTTTACGAAAA 133653 | || ||||||| Sbjct 1977302 TCTTGACGAAAA 1977291 >seq3972 Length=29216678 Score = 107 bits (118), Expect = 2e-18 Identities = 150/202 (74%), Gaps = 9/202 (4%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || |||||||| | ||| | | | ||||| ||||| |||| Sbjct 8003226 GGTGGACTCTTTCTGGATGTTGTAATCCGAAAGAGTGTGGCCA-TCCTCCAGCTGTTTGC 8003284 Query 133522 CCGCGTAAATG--AGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG 133579 |||| ||||| || ||||||||||| || |||||||| |||||||| ||| ||| | Sbjct 8003285 CCGC--AAATGTCAGGCGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT-TTTGG 8003341 Query 133580 C-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | |||| | ||| | |||||| ||||||| || || | || || || | | || |||| Sbjct 8003342 CTTTGACATTCTCGATGGTGTCGCTGGGCTCGACCTCAAGGGCGATGG-TCTCCCCGTCA 8003400 Query 133639 GAGTTTTTACGAAAATCTGCAT 133660 || || | || |||||||| Sbjct 8003401 AGGTCTTCGCAAAGATCTGCAT 8003422 >seq3641 Length=30143674 Score = 107 bits (118), Expect = 2e-18 Identities = 148/200 (74%), Gaps = 8/200 (4%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || |||||||| | ||| | | | ||||| ||||| |||| Sbjct 24919873 GGTGGACTCTTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCA-TCCTCCAGCTGTTTGC 24919815 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 || | | || || ||||||||||| || |||||||| |||||||| ||| ||| || Sbjct 24919814 CCCCAAATATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT-TTTGGCT 24919756 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||| | ||||| ||||||| || || | ||||| || | || ||||| Sbjct 24919755 TTGACATTCTC-ATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG---TCCCCGTCAGG 24919700 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || || || |||||||| Sbjct 24919699 GTCTTCACAAAGATCTGCAT 24919680 >seq1582 Length=98468360 Score = 89.7 bits (98), Expect = 5e-13 Identities = 143/199 (72%), Gaps = 5/199 (3%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||||| | | ||| | | | ||||| ||||| |||| Sbjct 98016039 GGTGGACTCCTTCTGAATGTTGTAATTGGAAAGAGTGCGGCCA-TCCTCCAGCTGTTTGC 98015981 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 |||| | || || ||||||||||| | ||| |||| ||||| || ||| || | Sbjct 98015980 CCGCAAATATCAGACGCTGCTGGTCAAGTGGG-TGCCCTCCTTATCTTGGATTTTGACTT 98015922 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | ||||| |||| | || || | ||||| ||| ||||| ||||| | Sbjct 98015921 TGACATTCTCGATGGTGTCACTGGG-TGGACCTCAAGGGTGATGGTCTTGCCCGTCAGGG 98015863 Query 133642 TTTTTACGAAAATCTGCAT 133660 || || ||||||||||| Sbjct 98015862 ACTTCAC-AAAATCTGCAT 98015845 >seq1 Length=114275543 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||| || || || | | | || || || |||||||| Sbjct 8597690 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCTAGTTGCTTGCC 8597632 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || | ||||| || ||||| || |||||||| || |||||| ||| Sbjct 8597631 AGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTT 8597572 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | || || | ||| || || || | |||| ||||| || || || || Sbjct 8597571 TACATTTTCTATTGTATCCGAGGGTTCAACTTCAAGAGTGATAGTTTTTCCTGTAAGGGT 8597512 Query 133643 TTTTACGAAAATCTGCAT 133660 |||||||||||||||||| Sbjct 8597511 TTTTACGAAAATCTGCAT 8597494 >seq233 Length=141296404 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || |||||||| || |||| || | ||||| || ||||| || |||||||| Sbjct 108315037 TCTTCTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCTGGAGGAATTCCTTCCTTA 108314978 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | || || | ||| || || |||| |||| Sbjct 108314977 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCGAGAGTGATA 108314918 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || || |||||||||||||||||||| Sbjct 108314917 GTCTTTCCTGTAAGGGTTTTTACGAAAATCTGCAT 108314883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483374403688720