Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 116 4e-21 seq3640 105 7e-18 seq2763 104 2e-17 seq233 100 3e-16 seq3641 95.1 1e-14 seq520 95.1 1e-14 seq3972 89.7 5e-13 seq1582 87.8 2e-12 seq4347 86.0 6e-12 seq1230 86.0 6e-12 seq4546 84.2 2e-11 >seq1 Length=114275543 Score = 116 bits (128), Expect = 4e-21 Identities = 161/223 (72%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| || | Sbjct 8597711 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 8597653 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| |||||||||| | |||||||| || || || ||||| Sbjct 8597652 TCCATCTTCTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 8597593 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | ||| || || | ||| || || ||||| Sbjct 8597592 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACTTCAAGAGT 8597533 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || ||||| || || | ||||| |||||||| ||||| ||| Sbjct 8597532 GATAGTTTTTCCTGTAAGGGTTTTTACGAAAATCTGCATCTTG 8597490 >seq3640 Length=31815103 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || | |||| || | ||| || ||||| || || || ||||||||||| Sbjct 21636582 CCTCCCCTCAAGCGCAGGACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAG 21636523 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| |||| | ||||||||| || || Sbjct 21636522 AGGGTGCGTCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGATCAGGAGGG 21636463 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || ||||| || ||| ||||| || | |||||| | ||||| Sbjct 21636462 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCGCTGGGCTCCACC 21636403 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || ||||| || ||||| | || || || || || |||||| Sbjct 21636402 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATT 21636355 >seq2763 Length=65901067 Score = 104 bits (114), Expect = 2e-17 Identities = 156/219 (71%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||||||| | ||| || | Sbjct 824238 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 824296 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| |||||||||| | |||||||| || || || ||||| Sbjct 824297 TCCATCTTCTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 824356 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | ||| || || | ||| || ||||||| Sbjct 824357 CTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGG 824416 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || ||||| |||||||| ||||| Sbjct 824417 GATAGTCTTTCCTGTACGGGTTTTTACGAAAATCTGCAT 824455 >seq233 Length=141296404 Score = 100 bits (110), Expect = 3e-16 Identities = 160/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| ||||| |||||||||||||| | ||| || | Sbjct 109921671 AGTCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAA-AGTACG 109921729 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| |||||||||| | |||||||| || || || ||||| Sbjct 109921730 TCCATCTTCTAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 109921789 Query 134615 TTTTTCTTG----AATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGA 134670 ||| || || || || || || || | ||| || || | ||| || || | Sbjct 109921790 TTTATCCTGGCCTTATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCGACCTCCA 109921849 Query 134671 GAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||| || || || || || | ||||| |||||||| ||||| ||| Sbjct 109921850 GAGTGATAGTCTTTCCTGTAAGGGTTTTTACGAAAATCTGCATCTTG 109921896 >seq3641 Length=30143674 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || | ||| ||||| || ||||| || || || |||||||| || | Sbjct 24919902 CCACCTCTCAGACGAAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCCGAA 24919843 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||| |||| |||| ||||||||| || || || Sbjct 24919842 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCCCAAATATCAGACGCTGCTGGTCAGGTGGG 24919783 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 ||||| || || ||||| ||||| |||||| Sbjct 24919782 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC 24919751 >seq520 Length=73916538 Score = 95.1 bits (104), Expect = 1e-14 Identities = 113/152 (74%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || || | ||| ||||| || ||||| ||||| || |||||||||||| Sbjct 72484325 CCACCTCTCAGACGGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 72484384 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || ||||| |||| | ||||||||| || || Sbjct 72484385 AGGGTGCGCCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGATCAGG-GGG 72484443 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 |||||||| || ||||| || ||| ||||| Sbjct 72484444 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGAC 72484475 >seq3972 Length=29216678 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || || | ||| ||||| || ||||| || || || |||||||| || | Sbjct 8003197 CCGCCTCGCAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAATCCGAA 8003256 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||||| || || ||||||||||| ||||| ||| |||||||| || || || Sbjct 8003257 AGAGTGTGGCCATCCTCCAGCTGTTTGCCCGCAAATGTCAGGCGCTGCTGGTCAGGTGGG 8003316 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 ||||| || || ||||| ||||| |||||| Sbjct 8003317 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC 8003348 >seq1582 Length=98468360 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/143 (74%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || ||||| ||||| ||||||||||| | | || ||| | Sbjct 98016059 AGACGAAGCACCAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAATTGGAAAGAGTGCGG 98016000 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||||||||| ||||| |||| ||||||||| || | || |||| || Sbjct 98015999 CCATCCTCCAGCTGTTTGCCCGCAAATATCAGACGCTGCTGGTCAAGTGG-GTGCCCTCC 98015941 Query 134616 TTTTCTTGAATTTTTTGTTTGAC 134638 || ||||| ||||| |||||| Sbjct 98015940 TTATCTTGGATTTTGACTTTGAC 98015918 >seq4347 Length=47401472 Score = 86.0 bits (94), Expect = 6e-12 Identities = 111/152 (73%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || | | ||| ||||| || ||||| ||||| || ||||| |||||| Sbjct 19988745 CCACCTCTCAGACAGAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTATAGTCGGAC 19988804 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||||| || | ||||| | || ||||| |||| | |||||||||||| || Sbjct 19988805 AGGGTGTGCCCATCTTTCAGCTGCTCCCCAGCAAAGATCAGCCTCTGCTGATCGGG-GGG 19988863 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 |||||||| || ||||| || ||| ||||| Sbjct 19988864 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGAC 19988895 >seq1230 Length=159902609 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || || | ||| ||||| || |||| || || || |||||||| || | Sbjct 130889236 CCACCTCGCAGACGAAGCACCAGGTGCAGGGTGGCCTCTTTCTGGATGTTGTAATCCGAA 130889177 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||| ||||| |||| | ||||||| || || || Sbjct 130889176 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGATGCTGCTGGTCAGGTGGG 130889117 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 ||||| || || ||||| ||||| |||||| Sbjct 130889116 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGAC 130889085 >seq4546 Length=144923918 Score = 84.2 bits (92), Expect = 2e-11 Identities = 152/222 (68%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 |||| |||||| || || || ||| |||||||||||||| ||||| | || | Sbjct 25087009 AGTCTCAACACAAGATGAAGAATGGTCTCCTTTTGAATGTTATAGTC----AAAGTACGT 25086954 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || || || ||||| |||||||||| | ||||| || | || || ||||| Sbjct 25086953 CCATCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTTTGCTGGTCAAGAGGAATTCCTTCC 25086894 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || || || || ||||| || || | ||| || |||||||| Sbjct 25086893 TTATCCTGGATCTTGGTCTTTACATTTTCTAATGTATCTGAGGGTTCAACCTCGAGAGTC 25086834 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || | | ||| | | |||||| ||||| ||| Sbjct 25086833 ATGGTCTTCCCCATAAGGGTTATTATGAAAATCTGCATCTTG 25086792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505349894388560