Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq3973 114 2e-20 >seq3973 Length=36798880 Score = 114 bits (126), Expect = 2e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| ||||| || ||||| || ||||| || ||||| || | | || | ||| | | Sbjct 11888111 AGATAATTGATGGAGAAGTGTATCCTCCCACAGTCAAAGATACTCAGGTAGAGATGATGT 11888052 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || || | | || ||| | | | || || |||| | ||| | ||||| || | Sbjct 11888051 ACCCTCCTCACATCCCTGAACACCTGCAGTTTGCTGTGGGGCAGGAGGTCTTTGGTCTGG 11887992 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||| || | ||| ||||||||| ||||||||| | || || ||| | || ||||| | Sbjct 11887991 TGCCTGGCCTAATGATGTACGCCACCATCTGGCTGCGGGAACATAACCGAGTGTGCGATG 11887932 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 |||| ||||||||||| || |||||| ||| || ||| ||||||||| Sbjct 11887931 TGCTTAAACAAGAGCATCCAGAATGGGGCGATGAGCAGTTGTTCCAGA 11887884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723271377366720