Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3640 134 1e-26 seq1230 118 9e-22 seq1582 114 1e-20 seq3641 113 4e-20 seq520 113 4e-20 seq3972 105 6e-18 seq1 98.7 9e-16 seq2763 95.1 1e-14 seq3398 89.7 4e-13 >seq3640 Length=31815103 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||||||| | || || || || ||||| || | Sbjct 21636356 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTGGAGCCCAGC 21636415 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| ||||| ||| || |||||||| |||||||| || || ||||| Sbjct 21636416 GACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGATCAG 21636475 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | ||||| || || ||||||| | ||| | || || |||||| Sbjct 21636476 CAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGACGCACCCTCTCTGACTACAAC 21636535 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || ||||| ||| | || ||||| |||| ||| |||| || Sbjct 21636536 ATCCAGAAAGAGTCCACCCTGCACTTGGTCCTGCGCTTGAGGGGAGG 21636582 >seq1230 Length=159902609 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| || ||| | || || ||||| || | || Sbjct 130889010 ATGCAGATCTTTGTGAAGACCCTGACGGGGAAGACCATCACCCTTGAGGTCAAGCCCAGT 130889069 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || ||| |||||| ||||| |||||||| || ||||| ||||| || || Sbjct 130889070 GACACCATCAAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 130889129 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||| | | |||| || |||||||| |||| || | || |||| ||||||||| Sbjct 130889130 CAGCATCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCGGATTACAAC 130889189 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||| | ||| | || |||| | ||| |||| |||||||| Sbjct 130889190 ATCCAGAAAGAGGCCACCCTGCACCTGGTGCTTCGTCTGCGAGGTGGCAT 130889239 >seq1582 Length=98468360 Score = 114 bits (126), Expect = 1e-20 Identities = 167/231 (72%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC-GTC 27046 |||||||| ||||| || | ||||| |||||| | || || ||||| || | || || Sbjct 98015845 ATGCAGAT-TTTGTGAAGTCCCTGACGGGCAAGACCATCACCCTTGAGGTCCACCCAGT- 98015902 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || |||| |||||| ||||| ||||| || || |||| |||| || || Sbjct 98015903 -GACACCATCGAGAATGTCAAAGTCAAAATCCAAGATAAGGAGGGCAC-CCACTTGACCA 98015960 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | |||| || |||||||| |||| || | || ||||| ||||||| Sbjct 98015961 GCAGCGTCTGATATTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCCAATTACAA 98016020 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||| ||| | || |||| | ||| ||| |||||||| Sbjct 98016021 CATTCAGAAGGAGTCCACCCTGCACCTGGTGCTTCGTCTGCAAGGTGGCAT 98016071 >seq3641 Length=30143674 Score = 113 bits (124), Expect = 4e-20 Identities = 164/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| || | | || || ||||| || || || Sbjct 24919680 ATGCAGATCTTTGTGAAGACCCTGACGGGGA---CCATCACCCTTGAGGTCGAGCCCAGT 24919736 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| |||||| ||||| |||||||| || ||||| ||||| || || Sbjct 24919737 GACACCAT-GAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 24919795 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | |||| | |||||||| |||| || | || |||| ||||||||| Sbjct 24919796 CAGCGTCTGATATTTGGGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCGGATTACAAC 24919855 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| ||| | || |||| | ||| || | |||||||| Sbjct 24919856 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTTCGTCTGAGAGGTGGCAT 24919905 >seq520 Length=73916538 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||||||| | || || || || || || || Sbjct 72484323 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTCGAGGTTGAGCCCAGT 72484264 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| ||||| ||| || |||||||| |||||||| || || |||| Sbjct 72484263 GATACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCCCCTGATCCG 72484204 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || || || || ||||||| | ||| | || || |||||| Sbjct 72484203 CAGAGGCTGATCTTTGCTGGGAAGCAGCTGGAAGATGGGCGCACCCTCTCTGACTACAAC 72484144 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || || ||||| ||| | || ||||| |||| ||| |||| || Sbjct 72484143 ATCCAGAAAGAGTCCACCATGCACTTGGTCCTGCGCTTGAGGGGAGG 72484097 >seq3972 Length=29216678 Score = 105 bits (116), Expect = 6e-18 Identities = 162/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| |||| || || |||| || | | | || | ||||| || || || | Sbjct 8003422 ATGCAGATCTTTGCGAAGACCTTGACGGGGA-GACCATCGCCCTTGAGGTCGAGCCCAGC 8003364 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| |||||| ||||| |||||||| || ||||| ||||| || || Sbjct 8003363 GACACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 8003304 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | | || || |||||||| |||| || | || |||| ||||||||| Sbjct 8003303 CAGCGCCTGACATTTGCGGGCAAACAGCTGGAGGATGGCCACACTCTTTCGGATTACAAC 8003244 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| ||| | || |||| | ||| |||| || ||||| Sbjct 8003243 ATCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTGCGAGGCGGCAT 8003194 >seq1 Length=114275543 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| || || || || |||| ||||||||||| ||||| || Sbjct 8597494 ATGCAGATTTTCGTAAAAACCCTTACAGGAAAAACTATCACTCTTGAAGTTGAACCCTCG 8597553 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || || || || ||||| || || || ||||| Sbjct 8597554 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 8597613 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| | ||||| | || | || || |||||| Sbjct 8597614 CAAAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGTACTTTGTCTGACTACAAC 8597673 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| || | ||| | || ||| | | || ||||| Sbjct 8597674 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 8597720 >seq2763 Length=65901067 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || ||||| || || |||||||||||| | || || | || ||||| || Sbjct 60922478 ATGCAAATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAGT 60922537 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || |||| || || || || || || || ||||| || || || || || Sbjct 60922538 GACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCTCCTGACCAG 60922597 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | |||||||| || ||||||| | || |||| || |||||| Sbjct 60922598 CAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 60922657 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||| | || |||| |||| || ||||||| || Sbjct 60922658 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGTAT 60922707 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||||||||| | || || || || ||||| || Sbjct 60922706 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 60922765 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || || || || || || || ||||| || || || || || Sbjct 60922766 GATACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCTCCTGACCAG 60922825 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| || |||||| Sbjct 60922826 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 60922885 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||||||| | || |||| |||| || | ||||| || Sbjct 60922886 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCGCCTGAGAGGTGGTAT 60922935 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || |||||||||||| | || || | || ||||| || Sbjct 60922934 ATGCAGATTTTCGTCAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAGT 60922993 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||||| || || || || || || || ||||| || || || || || Sbjct 60922994 GATACCATTGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCTCCTGACCAG 60923053 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||| | | || | || ||||| || ||||||| | || |||| || |||||| Sbjct 60923054 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAAC 60923113 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 || || || ||||||||| | || |||| | || ||| |||||||| Sbjct 60923114 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGCTTGAGGGGTGGC 60923161 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || |||||||| | || || ||| |||| |||| || || ||||| || Sbjct 824455 ATGCAGATTTTCGTAAAAACCCGTACAGGAAAGACTATCCCTCTCGAGGTTGAACCCTCG 824396 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || || || || ||||| || || || ||||| Sbjct 824395 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 824336 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||| ||| | ||||| | || | || || |||||| Sbjct 824335 CAAAGACTGATTTTTGCTGGCAAGCAACTAGAAGATGGACGTACTTTGTCTGACTACAAC 824276 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 |||||||||||||| || | ||| | || ||| | | || ||||| Sbjct 824275 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 824229 >seq3398 Length=72247402 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || |||||| | ||| | || || ||||| | || || Sbjct 17329927 ATGCAGATCTTTGTGAAGACCCTGACCAGGAAGACCATCACCCTTGAGGCTGAGCCCAGA 17329986 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | | ||| |||||| ||||| |||||||| || ||||| ||||| || | Sbjct 17329987 GACACCAGCCAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCCG 17330046 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || |||||||| |||| || | || |||| ||||||||| Sbjct 17330047 CAGCGTCTGATTTT-GCGGGCAAACAGCTGGAGGATGGCCGCACTCTTTCTGATTACAAC 17330105 Query 27168 ATTCA-AAAGG 27177 ||||| ||||| Sbjct 17330106 ATTCAGAAAGG 17330116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434876658706560