Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microcebus_20murinus_20[refseq_20GCF_5F000165445.2_202017-02-06] 7,678 sequences; 2,487,409,138 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq3188 87.8 1e-12 >seq3188 Length=83067054 Score = 87.8 bits (96), Expect = 1e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 1205 ATGGCACTTCACCCGTGCCACATCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCG 1264 ||||| || | |||||| ||| | | | |||| | ||||| || |||||| ||| || Sbjct 66355321 ATGGCGCTGCCCCCGTGTCACGCCCTCTGCCAGTTCTACGTGGTGGACGGCGAGCTGTC- 66355379 Query 1265 CTGC-AGGTCTACCAGCGCAGCGCGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTC 1323 |||| || | |||||||| | |||||| ||| || ||||||||||| |||||| Sbjct 66355380 CTGCCAGCTGTACCAGCGGTCGGGAGACATGGGCCTGGGCGTGCCGTTCAACATCGCCAG 66355439 Query 1324 GTACGCGCTCCTCGCGCACATGTTCGCGCA 1353 ||||| || ||| || ||||| ||||||| Sbjct 66355440 CTACGCCCTGCTCACGTACATGATCGCGCA 66355469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296103489337878