Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq21 228 8e-55 seq5 102 8e-17 >seq21 Length=146407008 Score = 228 bits (252), Expect = 8e-55 Identities = 584/883 (66%), Gaps = 20/883 (2%) Strand=Plus/Plus Query 16661 ACAACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCT 16720 || || ||||| || || || || || || | || || || ||||| || || | Sbjct 40656933 ACCACTCCCATCCTCTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGTCTTTC----- 40656987 Query 16721 AGAGATATATTCTCCATGAAATCAAAAGGATTAG-TAG-CTGAAAATATTTTAGAGTACC 16778 || || ||||||||||| || ||||| || || || ||||||| || | | | Sbjct 40656988 AGTGAAATATTCTCCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAA--AAC 40657045 Query 16779 CCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGT 16838 ||||||| || ||| || || ||||| || || ||||| ||||| ||| | Sbjct 40657046 CCAGTTCCAGCATG--TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAAT 40657103 Query 16839 TCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCG 16898 |||| || ||| | || || | || || || | ||| || ||||| ||| | Sbjct 40657104 TCATCCCAATAGGCTTCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAG 40657163 Query 16899 CTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACA 16958 | | |||| || |||| | ||| ||| | ||| || ||||| |||| Sbjct 40657164 CATTGATAATTATTTCTCTTACTCTCTACTCCAGTGGTTTGTGTACCAGGTGTTTGAACA 40657223 Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018 |||| || || ||||| || ||||| ||||| |||||||| |||||||| || ||||||| Sbjct 40657224 TCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATG 40657283 Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078 | | || |||||| |||||||||||| | ||| ||||||| || || | ||||||| Sbjct 40657284 TGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAA 40657343 Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138 || || || || | | ||||| | | | ||||| | | || || ||||||| Sbjct 40657344 AG---ATGCCTTCCGCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGT 40657400 Query 17139 TACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGG 17198 | |||||| | |||| || || || | ||| | ||| ||||||||| |||| Sbjct 40657401 CCCCAATCCAGNGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGG 40657460 Query 17199 CCTTAA--ATAATTTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGATGAGTAGGC 17255 | || | | || ||| |||| || | || || |||| || || || | || | | Sbjct 40657461 CATTGAGGAGAAATTCCCTTT---CTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAAC 40657517 Query 17256 TGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTT 17315 | |||||||| || |||||||| || ||||| || || || || | || || ||||||| Sbjct 40657518 TATACATTTCAGAATGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTT 40657577 Query 17316 CCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGC 17375 | | || |||||||| | ||||| ||| | | ||||| || || ||||| || | Sbjct 40657578 CTGTCATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCAC 40657637 Query 17376 TCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGC 17435 | || || || || ||| | ||| || |||| | | || | || | || Sbjct 40657638 TTGCTGCAAAGAAAACCAGAACATGGGATATAAAATCTCTCTCCTTGGGCTTCAGGGATT 40657697 Query 17436 GCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTG 17495 ||||| | | || ||||| | ||||| || |||| |||||| || ||| | | Sbjct 40657698 CCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCG 40657757 Query 17496 CCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 |||| |||||||| | ||| || |||| ||| | |||||||| Sbjct 40657758 CCTTCTTATACATCTGCCAGATNTCATGGTACTCGATGGGGAA 40657800 Score = 141 bits (156), Expect = 1e-28 Identities = 375/568 (66%), Gaps = 11/568 (2%) Strand=Plus/Minus Query 16959 TCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATG 17018 |||| || || || | || ||||| ||||| || ||||| |||||||| || ||||||| Sbjct 135420654 TCAGGCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATG 135420595 Query 17019 TCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAA 17078 | | || |||||| |||||||||||| | ||| |||||| || || || ||||||| Sbjct 135420594 TGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAA 135420535 Query 17079 AGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGT 17138 || | | | || || |||||||| | ||||| | | || ||||||||| Sbjct 135420534 AGCAGGTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCCATGGGTAACGTCTTTGT 135420475 Query 17139 TACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGG 17198 | | |||||| | | ||||| | || || | ||| | | | ||| ||||| |||| Sbjct 135420474 TCCCAATCCAATACAAGACCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTTCAATGG 135420416 Query 17199 CCTT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCT 17256 | || | | || ||| |||| | | | | || || || || || || || | Sbjct 135420415 CATTGAAGAGAAATTCCCTTTCT----TTGTTATCTTTAATGTGTGTCAATAAGGAGATT 135420360 Query 17257 GTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 | || || || |||||||| || || || | || || || || ||||| || ||| Sbjct 135420359 ATTTATGTCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTC 135420300 Query 17317 CGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCT 17376 | || |||| ||| ||| ||||| | | ||||| | || || || || | Sbjct 135420299 TGTAATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACA 135420240 Query 17377 CGCGGCGAAAAACGCC--AATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACG 17434 || || || || ||| |||||| | | || |||||| |||| || || | || | Sbjct 135420239 TGCTGCAAAGAAAGCCAGAATATAGGAT--ATAAAATATCTTTCCTCAGGCTTCAGGGCT 135420182 Query 17435 CGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACT 17494 ||||| | | || ||||| | |||||||| | || |||| ||| | || || Sbjct 135420181 TCCCAGTGCCAAATGTCCTTGGACAGGTCCACTTCCTGGGCCATCCAGAAAGAAACCTCT 135420122 Query 17495 GCCTTTTTATACATATTCCAAATATCAT 17522 | || |||||| | ||||||||||||| Sbjct 135420121 ACTTTCTTATACGTTTTCCAAATATCAT 135420094 >seq5 Length=126811233 Score = 102 bits (112), Expect = 8e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||| ||||||||||||||||| || |||||||| | || |||||| ||||||||||| Sbjct 9677574 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9677515 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| ||||||| || || || || |||||||| || || || || | ||||| | Sbjct 9677514 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9677455 Query 17106 C 17106 | Sbjct 9677454 C 9677454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515478335263320