Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq21 244 1e-59 seq19 107 2e-18 seq5 102 8e-17 >seq21 Length=146407008 Score = 244 bits (270), Expect = 1e-59 Identities = 595/889 (67%), Gaps = 26/889 (3%) Strand=Plus/Plus Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961 || ||||| || || || || || || | || || |||||||| || |||| | Sbjct 40656936 ACTCCCATCCTCTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGTCTTTCAGT----- 40656990 Query 15962 GATATATTTTCCATAAAATCAAAGGGATTAG-TAG-CTGAAAATATCTTAGAGTACCCCA 16019 || ||||| |||||||| ||||| || || || ||||||| ||| | |||| Sbjct 40656991 GAAATATTCTCCATAAAGTCAAATGGGTTCTCTACTCTGAAAAC--CTTGCTAAAACCCA 40657048 Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTA-AGTCGCAATTA 16078 ||||| | | ||| ||||| ||||| || || ||||| ||||| ||| |||||| Sbjct 40657049 GTTCC--AGCATGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGT-GCAATTC 40657105 Query 16079 ATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCT 16138 || || ||| | || || | || | || | |||| ||||||||| ||| || Sbjct 40657106 ATCCCAATAGGCTTCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCA 40657165 Query 16139 TCTTTAATGATATCGGTGGCTCG-TGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACAT 16197 | |||| || || | ||| | | ||| ||| | || |||||||| ||||| Sbjct 40657166 TTGATAATTATTTCTCTTACTCTCTACTCCAGT-GGTTTGTGTACCAGGTGTTTGAACAT 40657224 Query 16198 TAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGT 16257 || || || || || || |||| || || |||||||| |||||||| |||||||| || Sbjct 40657225 CAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGT 40657284 Query 16258 TAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAA 16317 | || ||||| |||||||||||| | ||||||||||| ||||| | || ||||| Sbjct 40657285 GAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAA 40657344 Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377 | || || || | | ||||| | | | ||||| | | ||||| ||||| | Sbjct 40657345 G---ATGCCTTCCGCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGTC 40657401 Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437 | |||||| | |||| || || || | || | |||| ||||||||| ||||| Sbjct 40657402 CCCAATCCAGNGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGC 40657461 Query 16438 CTTAA--ACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTG 16495 || | | || ||| | |||| | ||| |||| || || || | || ||||| Sbjct 40657462 ATTGAGGAGAAATTCCC--TTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTA 40657519 Query 16496 TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCC 16555 |||||||| || |||||||| || ||||| || || || ||| |||| || || || || Sbjct 40657520 TACATTTCAGAATGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCT 40657579 Query 16556 GCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTT 16615 | || || ||||| | |||||| ||| ||| ||| ||||| || || || |||||| Sbjct 40657580 GTCATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTT 40657639 Query 16616 GCAGCAA--AAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATAT 16673 || |||| ||||| || ||| | | || |||| | | || | | | || | Sbjct 40657640 GCTGCAAAGAAAACCAGAACATGGGAT--ATAAAATCTCTCTCCTTGGGCTTCAGGGATT 40657697 Query 16674 GCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTG 16733 ||| | | || ||||| | ||||| || || | ||||| ||| ||| | | Sbjct 40657698 CCCAGTGCCAAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCG 40657757 Query 16734 CCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782 |||| |||||||| | ||| || |||| ||| | ||||| || | ||| Sbjct 40657758 CCTTCTTATACATCTGCCAGATNTCATGGTACTCGATGGGGAAGATGAC 40657806 Score = 147 bits (162), Expect = 2e-30 Identities = 376/566 (66%), Gaps = 11/566 (2%) Strand=Plus/Minus Query 16199 AGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTT 16258 || || || |||| || |||| || || || ||||| |||||||| |||||||| || Sbjct 135420652 AGGCAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTG 135420593 Query 16259 AACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAG 16318 | || ||||| |||||||||||| | |||||||||| ||||| || || |||||| Sbjct 135420592 AGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAG 135420533 Query 16319 AATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA 16378 | | | || || ||||| || | ||||| | | ||| | ||||| || Sbjct 135420532 CAGGTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCCATGGGTAACGTCTTTGTTC 135420473 Query 16379 CGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCC 16438 | |||||| | | ||||| | || || | || | || | ||| ||||| ||||| Sbjct 135420472 CCAATCCAATACAAGACCCAAACTGCCTTCTTCTTGACAC-AGGCATTGTTTCAATGGCA 135420414 Query 16439 TT--AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGT 16496 || | | || ||| | |||| | |||| || || || ||||| || | | | | Sbjct 135420413 TTGAAGAGAAATTCCC--TTTCTTTGTTATC--TTTAATGTGTGTCAATAAGGAGATTAT 135420358 Query 16497 ACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCG 16556 || || || |||||||| ||||| || | || || ||||||||||| | || | Sbjct 135420357 TTATGTCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTCTG 135420298 Query 16557 CTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTG 16616 || || | ||| |||| ||||| ||| ||| |||| || || || |||| || Sbjct 135420297 TAATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATG 135420238 Query 16617 CAGCAAAAAACGCC--AATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATG 16674 | ||||| || ||| ||||| | | || |||||| |||| |||| | || | Sbjct 135420237 CTGCAAAGAAAGCCAGAATATAGGAT--ATAAAATATCTTTCCTCAGGCTTCAGGGCTTC 135420180 Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734 ||| | | || ||||| | |||||||| | | | |||| || | || || | Sbjct 135420179 CCAGTGCCAAATGTCCTTGGACAGGTCCACTTCCTGGGCCATCCAGAAAGAAACCTCTAC 135420120 Query 16735 CTTTTTATACATTTTCCAAATATCAT 16760 || |||||| ||||||||||||||| Sbjct 135420119 TTTCTTATACGTTTTCCAAATATCAT 135420094 >seq19 Length=137426304 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||| ||||| ||||||||||| | |||||||| |||| |||| Sbjct 98059013 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 98059072 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||| ||||||||| |||||||| || || || ||||| || || || |||| ||||| | Sbjct 98059073 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 98059132 Query 16344 CGATTAATCGTTCC 16357 | | | || |||| Sbjct 98059133 CCACCACTCTTTCC 98059146 >seq5 Length=126811233 Score = 102 bits (112), Expect = 8e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || ||||||||||||||||| |||||||| || | || ||||| |||||||||||| Sbjct 9677572 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9677513 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 | ||||||||||| ||||| || || |||||||| || || || || | ||||| || Sbjct 9677512 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGC 9677454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 509371625498680