Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq13 109 4e-19 seq21 98.7 8e-16 seq7 87.8 1e-12 seq9 84.2 2e-11 >seq13 Length=81577475 Score = 109 bits (120), Expect = 4e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||| || ||| | ||||| | || || || ||||| ||| ||| |||||| Sbjct 45553443 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 45553384 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || ||| | | || | ||| || || ||||| ||||| | || ||| Sbjct 45553383 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 45553324 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || |||||||| |||||||| ||||| ||| |||||||| ||| || | || ||| Sbjct 45553323 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 45553264 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 |||||||||||||| ||||||||||| | ||||| Sbjct 45553263 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 45553229 >seq21 Length=146407008 Score = 98.7 bits (108), Expect = 8e-16 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||| || ||| | ||||| | | ||| || ||||| ||| ||| |||||| Sbjct 111222533 AAAATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACCCTCGAGGTTGAACCC 111222592 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || | | | | || | ||| || || ||||| ||||| | || ||| Sbjct 111222593 TCGGATATGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 111222652 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 || |||||||| |||||||| ||||| ||| |||||||| ||| || | || ||| Sbjct 111222653 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 111222712 Query 25212 AATATTCAAAAGGAATCTACTCTTCA 25237 |||||||| ||||| ||||||||||| Sbjct 111222713 AATATTCANAAGGAGTCTACTCTTCA 111222738 >seq7 Length=99894491 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208 ||||| |||||||| |||||||| ||| | ||| |||||||| ||| || | || Sbjct 60057587 GATCAGCAAAGACTGATCTTTGCTGGCCAGCAACTGGAAGATGGACGTACTTTGTCTGAC 60057528 Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246 ||||||||||||||||| ||||||||||| | ||||| Sbjct 60057527 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 60057490 >seq9 Length=88628999 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 |||||||| || ||||| ||||| | | ||| || ||||| ||| || |||||| Sbjct 60029682 AAAATGCAGATTTTCATGAAAACCCTTATGGGGAAGACCATCACCCTTGAGGTTGAACCC 60029741 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | || | ||| || || ||||| ||||| | || | | Sbjct 60029742 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGCT 60029801 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 | |||||| |||||||| ||||| ||| |||||||| ||| || | || ||| Sbjct 60029802 TAGCAAAGAGGGATCTTTGCTGGCAAGCAACTGGAAGATGGATGGACTTTGTCTGACTAC 60029861 Query 25212 AATATTCAAAAGGAATCTACTCTTCA 25237 |||||||||||||| ||||||||||| Sbjct 60029862 AATATTCAAAAGGAGTCTACTCTTCA 60029887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409196950450286