Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq20 98.7 1e-15 seq1 89.7 8e-13 seq13 87.8 3e-12 seq8 84.2 3e-11 >seq20 Length=124503471 Score = 98.7 bits (108), Expect = 1e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || |||||||| || || | ||| | | | | | Sbjct 36580429 ATGCAGATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTCAAGCCCAGT 36580370 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| |||||||||||||| || ||||| |||||||| || Sbjct 36580369 GACACCATTGAGAATGTCAAAGCCAAAATTCAAGATAAGGAGGGTATCCCACCTGACCAG 36580310 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || || ||||| || ||||| | || ||| | || || | ||| || || Sbjct 36580309 CAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAAC 36580250 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || ||| | || || |||| |||| || || | |||||||| |||| Sbjct 36580249 ATCCAGAAAAAGTCCACCCTGCACCTGGTGTTGCGCCTGCGAGGTGGCATTA 36580198 >seq1 Length=215897965 Score = 89.7 bits (98), Expect = 8e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || ||||||||||| || || | ||| |||| | | | Sbjct 203081960 ATGCAGATCTTTGTGAAGACCCTCACAGGCAAAACCATCACCCTTGAGGTTGAGCCCAGT 203082019 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||| ||||||||| | || || ||||| |||||||| || Sbjct 203082020 GACACCATTGAGAATGACAAAGCCAAAATTCAACACAAGGAGGGTATCCCACCTGACCAG 203082079 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 | || || ||||| || ||||| | || ||| | || || | ||| || || Sbjct 203082080 TAGCATCTGATATTTGCCGGTAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAAC 203082139 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || ||||| || || |||| |||| || || | | |||||| |||| Sbjct 203082140 ATCCAGAAAGAGTCCACCCTGCACCTGGTGTTGCGCCTGCAAGGTGGCATTA 203082191 >seq13 Length=81577475 Score = 87.8 bits (96), Expect = 3e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | || || || ||||| || || || || | ||| ||||| | Sbjct 45553441 AATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCCTC 45553382 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| |||| || || || ||||| ||||| || || |||||||| Sbjct 45553381 GGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 45553322 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||||| || || ||||| || || ||| | || ||| | || || || || || || Sbjct 45553321 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAA 45553262 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750 ||||||||| || || ||| | ||| | || || Sbjct 45553261 TATTCAAAAGGAGTCTACTCTTCATCTTGTGTT 45553229 >seq8 Length=70300957 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || || | ||||| || || ||||| || || || | ||| | || | | Sbjct 14509016 AATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 14508957 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || ||| |||| ||||| |||||||||||||| || || || || || Sbjct 14508956 TGACACCATCGAAAATGTAAAGGCCAAAATCCAAGATAAAGAAGGCATCCCCCCCGACCA 14508897 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || |||||||| || || | || ||| | || || | || || || Sbjct 14508896 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAA 14508837 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || || |||| |||| | ||| | |||||||||| Sbjct 14508836 CATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGAGGTGGTAT 14508786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752438434883200