Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq13 98.7 1e-15 seq21 96.9 5e-15 seq7 93.3 6e-14 seq15 89.7 8e-13 >seq13 Length=81577475 Score = 98.7 bits (108), Expect = 1e-15 Identities = 106/138 (77%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| |||||| || || | ||| | |||||| || ||| || ||||| || || || Sbjct 45553214 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 45553272 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| ||||| Sbjct 45553273 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 45553332 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 45553333 AATTCCTTCCTTATCCTG 45553350 >seq21 Length=146407008 Score = 96.9 bits (106), Expect = 5e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | |||||| || | | ||| | |||||| || || ||||| || || || Sbjct 111222762 CCACCACGAAGTCTCAACNCAAGATGAAGAGTAGACTCCTTNTGAATATTGTAGTCAGAC 111222703 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| |||||| Sbjct 111222702 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 111222643 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| ||||| || Sbjct 111222642 ATTCCTTCCTTATCCTG 111222626 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || | ||||| | ||||| || ||| || || || | || || Sbjct 1220618 CCACCACAAAGTCTCAACAAAAAATGAAGAGTAGGCTCCTTTTGA-ATGTTGCAGTCAGA 1220560 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| | |||||||| |||| |||||||||||| ||||| Sbjct 1220559 CAAAGTACGTCCATCTTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 1220500 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 1220499 AATTCCTTCCTTATCCTG 1220482 >seq7 Length=99894491 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | |||||| || ||| || ||||| || || || Sbjct 60057475 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGA-ATATTGTAGTCAGA 60057533 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| | |||||||| |||| |||||||||||| ||||| Sbjct 60057534 CAAAGTACGTCCATCTTCCAGTTGCTGGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 60057593 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| || || || Sbjct 60057594 AATTCCTTCCTTCTCCTG 60057611 >seq15 Length=160576332 Score = 89.7 bits (98), Expect = 8e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 10437 GGATGTTATGCAAGATTAGCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATT 10496 || ||||||| |||| ||| ||| | |||| || ||| ||| | ||||||||| | Sbjct 77992198 GGGTGTTATGGAAGAGTAGTTCCATGGTCTGGCTTGGCTGCAAAACACTTTATTGATGTA 77992139 Query 10497 GGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAAT 10553 |||||||| || || |||||| |||||||||||||||| || || || | |||||| Sbjct 77992138 GGAGCTGGTGTCATAGACGAAAATTATAGAGGAAATGTTGGTGTTGTACTGTTTAAT 77992082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740556486030080