Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq21 268 9e-67 seq19 107 2e-18 seq5 98.7 9e-16 >seq21 Length=146407008 Score = 268 bits (296), Expect = 9e-67 Identities = 615/918 (67%), Gaps = 20/918 (2%) Strand=Plus/Plus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||| || ||| ||| | | ||| ||| ||| || | |||||| ||| ||| Sbjct 40656886 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACACCACTCCCATCC 40656945 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 | ||||| || || |||||||| |||||||| || || |||| | ||||||||| | Sbjct 40656946 TCTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 40657000 Query 16005 CCATAAAATCAAAAGGATTTTTTGAACAATAGTATTTATCGC---ATCCCAATTCCAACA 16061 ||||||| ||||| || || | | || | | | | || | |||| ||||| || Sbjct 40657001 CCATAAAGTCAAATGGGTTCTCT--ACTCT-GAAAACCTTGCTAAAACCCAGTTCCAGCA 40657057 Query 16062 ATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATTA 16121 ||| || |||||||| || || || || ||||||| | || ||||| || || Sbjct 40657058 TG--TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATAG 40657115 Query 16122 ATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATTA 16181 || ||||| | || || || | || || | |||||| ||| || | || |||| Sbjct 40657116 GCTTCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCATTGATAATTA 40657175 Query 16182 TATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAAGCA 16240 | ||||||||| | ||| | | || || || | |||||| ||||| | |||||| Sbjct 40657176 TTTCTCTTACT-CTCTACTCCAGTGGTTTGTGTACCAGGTGTTTGAACATCAGGCAAGCA 40657234 Query 16241 AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGC 16300 |||||||| || || || || || || || || | || || |||||||| || || ||| Sbjct 40657235 AAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGC 40657294 Query 16301 ATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCT 16360 || ||||||||||| || | ||| ||||| | ||||| ||||||||||| || ||| Sbjct 40657295 ATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAG---ATGCCT 40657351 Query 16361 TCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccat 16420 || |||| ||||| | || | || ||||| | || | ||| | ||||| Sbjct 40657352 TCCGCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGTCCCCAATCCAG 40657411 Query 16421 tttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAA 16480 ||||||| ||| || | || ||||| ||| | || || ||||| | | | Sbjct 40657412 NGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAGGAGA 40657471 Query 16481 TAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAA 16540 | | |||||||| |||| || ||||| ||| | || |||||||||||||| ||| Sbjct 40657472 AATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTATACATTTCAGAA 40657531 Query 16541 TGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACT 16600 || || || || || || || || || ||| | || || | ||||| | || || ||| Sbjct 40657532 TGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTGTCATCTGAACT 40657591 Query 16601 TCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAAC 16660 || | ||| | || | |||||||| || ||||| ||||| || |||||||| || Sbjct 40657592 TCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAA 40657651 Query 16661 GCAAGTATGTGTTTAATAAAAtttttttCGTT-ATCTGAAAGTTTTAACCAGTCAGAAAA 16719 | || | || ||||||| | | || || || | | || ||||| ||| Sbjct 40657652 ACCAGAACATGGGATATAAAATCTCTCTCCTTGGGCTTCAGGGATT-CCCAGTGCCAAAT 40657710 Query 16720 ATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTTTATACAT 16779 || || || | || ||||| || | ||||| || ||||| | ||||| |||||||| Sbjct 40657711 GTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCGCCTTCTTATACAT 40657770 Query 16780 TTTCCATATGTCTTCGTA 16797 | ||| || || | ||| Sbjct 40657771 CTGCCAGATNTCATGGTA 40657788 Score = 116 bits (128), Expect = 3e-21 Identities = 300/455 (66%), Gaps = 3/455 (1%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||||||| | ||| || || || || || || || || | || || |||||||| || Sbjct 135420649 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 135420590 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 || ||||| ||||||||||| || | ||| ||||| ||||| |||||||||||| | Sbjct 135420589 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGCAG 135420530 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 | | ||| ||| |||||| || | | || || || | || | ||| | | Sbjct 135420529 GTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCA 135420470 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 ||||| | ||||| ||| || | || |||||| ||| | || || ||||| Sbjct 135420469 ATCCAATACAAGACCCAAACTGCCTTCTTCTTGACACAG-GCATTGTTTCAATGGCATTG 135420411 Query 16475 AATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATT 16534 || | | | | |||||||| ||||| ||| | || || || || | | ||| || Sbjct 135420410 AAGAGAAATTCCCTTTCTTTGTTATCTTTAATGT--GTGTCAATAAGGAGATTATTTATG 135420353 Query 16535 TCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATT 16594 || ||||| || || || || || | || || ||||| ||||| | ||| | || Sbjct 135420352 TCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAATC 135420293 Query 16595 TGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCA 16654 || | ||| ||| ||| | |||||||| | ||||| ||||| | |||||| Sbjct 135420292 TGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGCA 135420233 Query 16655 AAAAACGCAAGTATGTGTTTAATAAAAtttttttC 16689 || || || || || | ||||||| | |||| Sbjct 135420232 AAGAAAGCCAGAATATAGGATATAAAATATCTTTC 135420198 >seq19 Length=137426304 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 15885 TTTAAAAATCAATATCTAGAGAAAACACATTATCTTTTTTATTTGACATAACTGACATTT 15944 |||||||||| ||| | | || | |||||| | | | || |||||||| | Sbjct 118922276 TTTAAAAATCTGCATCCAAGGTGAAGATGTTATCTGTGGTTTCTGCCATAACTGCAAAAC 118922217 Query 15945 TTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTTT 16004 ||||| || ||||| || |||||||||||||||||||||||||| ||||| |||| Sbjct 118922216 GCTGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTT 118922157 Query 16005 CCATAAAATCAAAAGGATTTTTTG 16028 ||||||||||||||||||||| || Sbjct 118922156 CCATAAAATCAAAAGGATTTTCTG 118922133 >seq5 Length=126811233 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || || || || || | || || |||||||| || || ||||| ||||||||||| || Sbjct 9677572 TCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9677513 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| | ||||| ||||| |||||||| || ||||| ||||| ||||| || Sbjct 9677512 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCT 9677453 Query 16379 ACCAATCGCTCACC 16392 || | || ||||| Sbjct 9677452 ACGACACGTTCACC 9677439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460664559411400