Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq20 123 2e-23 seq16 114 1e-20 seq8 113 4e-20 seq1 111 1e-19 >seq20 Length=124503471 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||||| || | || |||| |||||| ||| || ||||| ||||||||||| Sbjct 36580202 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGTCTGA 36580261 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| ||||| ||||| ||||||| ||||| ||||| || || Sbjct 36580262 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 36580321 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||||||||| || |||||| || || | | | | |||| | || || Sbjct 36580322 GATACCCTCCTTATCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTTGAC 36580381 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||| | ||| || || |||||||| || |||||||||||||| |||||||| Sbjct 36580382 CTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 36580432 >seq16 Length=174288623 Score = 114 bits (126), Expect = 1e-20 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||||||| || | || |||| |||||| ||| ||| || || ||||||||||| Sbjct 78464824 GCCACCTNGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTNTGGATGTTGTAGTCTGA 78464765 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| ||||| ||||| ||||||| |||| ||||| || || Sbjct 78464764 GAGAGTGCGGCCATCTTCCAGCTGTTTNCCGGCAAATATCAGANGCTGCTGGTCAGGTGG 78464705 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| |||||| || || | | | |||| | ||| || Sbjct 78464704 GATACCCTCCTTGTCTTGAATTTTGACTTTGACGTTCTCAGTGGTGTCACTGGGCTCGAC 78464645 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||| | ||| || || |||||| | | |||||||||||||| |||||||| Sbjct 78464644 CTCAAGGGTGATGGTTTTGCCCATGTGGGTCTTCACAAAGATCTGCATGTT 78464594 >seq8 Length=70300957 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | |||| |||||| || ||||||||| ||||||||||| Sbjct 14508561 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 14508620 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| || || || || || || | || ||| |||||||| || Sbjct 14508621 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 14508680 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || ||||| ||| ||||| ||| || | | | |||| | ||||||| Sbjct 14508681 ATGCCTTCCTTATCCTGGATTTTGGCCTTYACATTTTCGATGGTGTCACTGGGCTCCACC 14508740 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || |||||||| ||||| |||||||| ||||| ||||| Sbjct 14508741 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14508787 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||||| | | |||| |||||| || ||||||||| ||||||||||| Sbjct 14508789 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 14508848 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 || ||| | || ||||| || || || || || || | || ||| |||||||| || Sbjct 14508849 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 14508908 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | || || || || ||||| ||| || | | | |||| | ||||||| Sbjct 14508909 ATGCCTTCTTTATCTTGGATTTTGGCCTTTACATTTTCGATGGTGTCACTGGGCTCCACC 14508968 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 |||| ||| || |||||||| ||||| |||||||| ||||| ||||| ||| Sbjct 14508969 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 14509019 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| |||| | | |||| |||||| || ||||||||| ||||||||||| Sbjct 14508332 GCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 14508391 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| || || || || || || | || ||| |||||||| || Sbjct 14508392 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 14508451 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | || || || || || || ||| || | | | |||| | |||||| Sbjct 14508452 GATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCAC 14508511 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||| || |||||||| ||||| |||||||| ||||| ||||| Sbjct 14508512 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14508559 >seq1 Length=215897965 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 ||||||| || | || |||| |||||| ||| ||| ||||| ||||||||||| Sbjct 203082187 GCCACCTTGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 203082128 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || ||| | || ||||| ||||| ||||| ||||||| ||| ||||| || || Sbjct 203082127 GAGAGTGCGGCCATCTTCCAGCTGTTTACCGGCAAATATCAGATGCTACTGGTCAGGTGG 203082068 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||||||||||| |||||| || | | | | | |||| | ||| || Sbjct 203082067 GATACCCTCCTTGTGTTGAATTTTGGCTTTGTCATTCTCAATGGTGTCACTGGGCTCAAC 203082008 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||| | ||| || || ||||| || || |||||||||||||| |||||||| Sbjct 203082007 CTCAAGGGTGATGGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATGTT 203081957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 393536578275529