Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 1e-13 seq20 86.0 5e-12 seq13 84.2 2e-11 >seq8 Length=70300957 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || || || ||||||||||| | | || | |||| Sbjct 14508804 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 14508863 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||| ||||| Sbjct 14508864 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCT 14508923 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | | | | ||||||| |||||| || | ||||||| | Sbjct 14508924 TGGATTTTGGCCTTTACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14508983 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 |||||||||| || || || || || |||||||| Sbjct 14508984 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 14509018 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || || || || ||||||||||| | | || | |||| Sbjct 14508576 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCT 14508635 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 |||| || ||||| ||| |||| || || || || || ||| | |||||||||||| Sbjct 14508636 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTATCC 14508695 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 |||| ||| || | | | | ||||||| |||||| || | ||||||| | Sbjct 14508696 TGGATTTTGGCCTTYACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14508755 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||||||||| || || || || || ||||| Sbjct 14508756 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14508787 >seq20 Length=124503471 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| ||| || || || | ||| || ||||||||||| | | || | ||||||| Sbjct 36580221 ACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCTTCC 36580280 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 | |||||||| ||| | || || | || || || || | || |||||||| | Sbjct 36580281 AGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCTTGA 36580340 Query 18237 ATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTT 18295 |||| | || ||||| | ||| ||||||| ||||| | |||| ||||||| |||| Sbjct 36580341 ATTT-TGGCTTTGACATTCTCAATGGTGTCACTGGGCTTGACCTCAAGGGTGATGGTTTT 36580399 Query 18296 GCCGGTCAATGTTTTTACAAAAATTTGCATTTTT 18329 ||| || | || || ||||| || ||||| ||| Sbjct 36580400 GCCCGTGAGGGTCTTCACAAAGATCTGCATGTTT 36580433 >seq13 Length=81577475 Score = 84.2 bits (92), Expect = 2e-11 Identities = 171/253 (68%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 18078 AATACATTTTCTTTTTGTTATCCTCCCCGT--AGTCTAAGTACCATGTGAAGTGTTGATT 18135 || || | ||| |||| ||| | | || | ||||| | || | ||||| || || | Sbjct 45553191 AAGACTTCTTCCTTTTCTTAGCACCACCATGAAGTCTCAACACAAGATGAAGAGTAGACT 45553250 Query 18136 CTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGA 18195 | |||||||| |||||||| | || || | |||||||| ||| ||||| ||| ||| Sbjct 45553251 CCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGA 45553310 Query 18196 TAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTG 18255 | |||||||| ||||| || | ||||||||||| || | ||| || | | Sbjct 45553311 TCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTT 45553370 Query 18256 CAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAA 18315 | | || || ||| || || | ||||||| | || || || | ||||| || | Sbjct 45553371 CTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGA 45553430 Query 18316 AAATTTGCATTTT 18328 |||| |||||||| Sbjct 45553431 AAATCTGCATTTT 45553443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 377866643488005