Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq21 248 8e-61 seq19 114 1e-20 seq6 93.3 4e-14 >seq21 Length=146407008 Score = 248 bits (274), Expect = 8e-61 Identities = 614/917 (67%), Gaps = 35/917 (4%) Strand=Plus/Plus Query 11308 ATTCTCTTCTTTATTTGTAAACACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGA 11366 ||||||| | | ||| | ||| |||||| | ||||| || || |||| || | || | Sbjct 40656914 ATTCTCTGTTGGACTTGACACCACTCCCATCCTCTGATACTCCCTTACTC-TCTTCTCAA 40656972 Query 11367 AAAAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATATACAT 11426 | || || ||||| | ||||| |||| |||||||||| ||| || || | ||| Sbjct 40656973 AGAAGTTCGTCTTTC-----AGTGAAATATTCTCCATAAAGTCAAATGGGTTCTCTACTC 40657027 Query 11427 TGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACT 11486 |||| || || | |||| | || | ||| ||||| || || || || || | Sbjct 40657028 TGAAAACCTTGCTAAAACCCAGTTCCAGCATG--TCTGTCTGCCACAAACTCAATGTATT 40657085 Query 11487 GAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACT 11546 | ||||| | |||||||| || ||| | | ||| || | || | || | || | Sbjct 40657086 GCTTCATTAGAGTGCAATTCATCCCAATAGGCTTCACAGGCAAGGCCTCAGTGAGGAATT 40657145 Query 11547 CCTTTTCTATATTAACCGCATCAATGATTATCGACGTTA-TAACTTCCTTAGATGGTGGA 11605 || |||||| ||| |||| || ||||| ||| | || | || |||| Sbjct 40657146 TCTGTTCTATCCGAACAGCATTGATAATTATTTCTCTTACTCTCTACTCCAG-TGGTTTG 40657204 Query 11606 TGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTT 11665 |||| | ||||| ||||| | || ||||||||||| |||||||| || ||||| || Sbjct 40657205 TGTACCAGGTGTTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTA 40657264 Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725 || |||||||| |||||||| | || ||||||| ||||||||| || | ||| ||||| Sbjct 40657265 ATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATC 40657324 Query 11726 GCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT 11785 | ||||| ||||||||||| || || ||| | || ||||| |||| || | ||| Sbjct 40657325 GATGCAAAATAACCAGAAAAG---ATGCCTTCCGCTGCAGCAAAGACTACAACACGTTCA 40657381 Query 11786 CCATA--TA----CCTTGTTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTT 11839 ||| | || | |||| | | ||||| ||||||||| || ||||| || Sbjct 40657382 CCACAGGTAGCNTCTTTGTCCCCA---ATCCAGNGCAAGGCCCAATCTGCCTTCTTCTTG 40657438 Query 11840 ACGCATTCCATTGTTTCTATAGCGTTAA--ATAAATGCATTTTTTCTATATTATCTCTTA 11897 || || ||| ||||| || || || | | |||| | ||||| | |||| ||| Sbjct 40657439 ACACAAGGCATCGTTTCAATGGCATTGAGGAGAAATTC--CCTTTCTTTGGGATCTTTTA 40657496 Query 11898 CATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAA 11957 || || ||| | | |||||||||||||| ||||| || ||||| || || ||||| | Sbjct 40657497 TGTAAGTGTCTGTAAGGAAACTATACATTTCAGAATGTATGTTTTCNATGGCAATTTGGA 40657556 Query 11958 ATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAAT 12017 | ||| ||||||| || || |||| ||| || || ||||| ||| | || | Sbjct 40657557 AGCCANAGAAACAGCGGGCTTCTGTCATCTGAACTTCTTGGCTAAATCGCTCCACCAAGT 40657616 Query 12018 TCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTATATGTTTTATAAAGTATT 12077 | |||||||| || |||||||| | |||||| || | || | ||| |||||| || Sbjct 40657617 TTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACCAGAACATGGGATATAAA--ATC 40657674 Query 12078 TTTCGTCTTTAG-TTAATTTA-TCCCAATCATCTAAA--TCTTTTGATAAATCTACTTCT 12133 | || ||| | || | | ||||| | | ||| || || || | || || || Sbjct 40657675 TCTCTCCTTGGGCTTCAGGGATTCCCAGT--GCCAAATGTCCTTGGACAGGTCCACCTCC 40657732 Query 12134 TCAACGGTCCAAAAACTTGCCACTGATTGTTTATACATTTTCCAGATATCATGATACTTA 12193 || ||||||| || || | | | |||||||| | |||||| ||||| |||| Sbjct 40657733 TCGGCGGTCCAGAAGGAAGCNTCCGCCTTCTTATACATCTGCCAGATNTCATGGTACTCG 40657792 Query 12194 ATAGGGAAAATAACGAA 12210 || ||||| || || || Sbjct 40657793 ATGGGGAAGATGACAAA 40657809 Score = 165 bits (182), Expect = 8e-36 Identities = 319/463 (69%), Gaps = 16/463 (3%) Strand=Plus/Minus Query 11630 CACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAAT 11689 || ||||| | ||| |||||||| || || || || || |||||||| |||||||| | Sbjct 135420649 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 135420590 Query 11690 CCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAAT 11749 || ||||||| ||||||||| || | ||| ||||| ||||| |||||||||||| | Sbjct 135420589 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGCAG 135420530 Query 11750 ATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCAT--ATA----CCTTGTTGCTA 11803 | | ||||| ||||| ||| | || | |||||||| || | ||||| | | Sbjct 135420529 GTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCA 135420470 Query 11804 GATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCG 11863 ||||| | | ||||| | || ||||| || || || ||||||||| || || Sbjct 135420469 ---ATCCAATACAAGACCCAAACTGCCTTCTTCTTGACACA-GGCATTGTTTCAATGGCA 135420414 Query 11864 TT--AAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTAT 11921 || | | |||| | ||||| | |||||| ||| || ||| || || | | | ||| Sbjct 135420413 TTGAAGAGAAATTC--CCTTTCTTTGTTATCT-TTA-ATGTGTGTCAATAAGGAGATTAT 135420358 Query 11922 ACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTG 11981 || || ||||| || ||||| ||||| |||| || |||||||| || | |||| Sbjct 135420357 TTATGTCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTCTG 135420298 Query 11982 AACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAG 12041 | ||| | || | |||| |||| | || || |||| ||| || ||||||| | Sbjct 135420297 TAATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATG 135420238 Query 12042 ATGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTC 12084 |||||| || || || |||| |||||| ||| |||| || Sbjct 135420237 CTGCAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTC 135420195 >seq19 Length=137426304 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711 |||| ||||| || || |||||||| ||||| || | ||| ||||| | |||| || | Sbjct 98059013 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 98059072 Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771 ||| ||| |||||||||||||| || || || ||||| ||||| || ||||| ||||| | Sbjct 98059073 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 98059132 Query 11772 CTACTACTCTTTCTCC 11787 | || |||||||| || Sbjct 98059133 CCACCACTCTTTCCCC 98059148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 11890 ATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGC 11949 |||||||| || || ||||| | ||||| ||||| |||||||||| ||| || || Sbjct 98065133 ATCTCTTATGTAAGTGTCTATCAGCAAACTGTACATCTCTGAATGAACATTCTCGATGAG 98065192 Query 11950 TATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCC 11995 |||||||| ||||||||||| || ||||||| | ||| || ||| Sbjct 98065193 AATTTGAAAGCCATAGAAACAGCGAGCCTCTGGAACCTGCACCTCC 98065238 >seq6 Length=126788305 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| ||||| || || ||||| | ||||| || ||||| || || ||||||||| Sbjct 66007901 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 66007960 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 ||||||||||| | | || |||| || || || |||||||| || || || || | Sbjct 66007961 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 66008020 Query 37258 CTATTTCTCAATCCAT 37273 || ||||| | |||| Sbjct 66008021 CTGTTTCTTATACCAT 66008036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466653342108560