Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq21 352 4e-92 seq6 120 4e-22 seq5 116 5e-21 seq19 111 2e-19 >seq21 Length=146407008 Score = 352 bits (390), Expect = 4e-92 Identities = 645/939 (69%), Gaps = 26/939 (3%) Strand=Plus/Plus Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669 |||| |||||| |||| | | |||| ||| ||| | || |||| |||||||| Sbjct 40656886 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACACCACTCCCATCC 40656945 Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729 | || || || | || | || || || || || || |||| | ||| ||||| | Sbjct 40656946 TCTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 40657000 Query 49730 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 49789 |||| || ||||| || || || | ||| || |||| |||| ||| || Sbjct 40657001 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 40657059 Query 49790 ATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 49849 ||| || || ||||| || || ||| ||||| | |||||||| || ||| | | Sbjct 40657060 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATAGGCT 40657118 Query 49850 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 49909 | || || | ||| |||| || |||| ||||| || || |||| | || || Sbjct 40657119 TCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCATTGATAATTATTT 40657178 Query 49910 ATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAA 49968 ||| || | | || || | | | | || | | ||||| ||||||| || || ||| Sbjct 40657179 CTCTTACTCTCTACTCCAGTGGTTTG-TGTACCAGGTGTTTGAACATCAGGCAAGCAAAA 40657237 Query 49969 TCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATT 50028 || ||||| | |||||| ||||| ||||| ||||| |||||||| ||||| || ||||| Sbjct 40657238 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATC 40657297 Query 50029 AGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 || || || || || ||||| ||||| || ||||| | |||||||||| | ||||| Sbjct 40657298 AGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGATG---CCTTCC 40657354 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTATCCACTTT 50145 |||| |||||| | |||| | || ||| | | || |||| ||||| Sbjct 40657355 GCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGTCCCCAATCCAGNGC 40657414 Query 50146 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 50205 |||||||| |||||||| || ||||||||||||||||| |||||||| | |||| | Sbjct 40657415 AAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAGGAGAAAT 40657474 Query 50206 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 50265 | |||| || |||||| | ||||| || | | | |||||||||||| ||||| Sbjct 40657475 TCCCTTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTATACATTTCAGAATGT 40657534 Query 50266 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325 |||||||| ||||| || || || || ||||||| | || || || ||||| |||||| Sbjct 40657535 ATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTGTCATCTGAACTTCT 40657594 Query 50326 GTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 50385 | |||||| || | || |||||||| ||||| || ||||| |||||||| || || Sbjct 40657595 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACC 40657654 Query 50386 AATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG----AT 50441 | ||||| |||||||| | | || ||||| | || ||||| || || || Sbjct 40657655 AGAACATGGGATATAAAATCTCTCTCCTTGGGCTTCAG-GGATTCC---CAGTGCCAAAT 40657710 Query 50442 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 50501 || || || | || || || || | ||||| || || || || ||||| |||||||| Sbjct 40657711 GTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCGCCTTCTTATACAT 40657770 Query 50502 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 | |||||| ||||| || | ||| ||||| || ||||| Sbjct 40657771 CTGCCAGATNTCATGGTACTCGATGGGGAAGATGACAAA 40657809 >seq6 Length=126788305 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| |||||||| || |||||| ||| | || || || || ||||||| Sbjct 66005053 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 66005112 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| |||||| |||||||| ||||| || || || || || ||||| || | | || | Sbjct 66005113 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 66005172 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 66005173 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 66005223 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||| ||||| ||||||||||||||||||||||| | || |||||||||| | ||| Sbjct 66016448 ACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 66016507 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 66016508 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 66016567 Query 80059 TCCAAGTATATGGC 80072 |||||||| || || Sbjct 66016568 TCCAAGTAAATAGC 66016581 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 66007901 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 66007960 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 66007961 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 66008020 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 66008021 CTGTTTCTTATACCATA 66008037 >seq5 Length=126811233 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| || || ||||| |||||||| ||||| || ||||| || || || || | Sbjct 9677574 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9677515 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct 9677514 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9677455 Query 50102 CAAC 50105 | || Sbjct 9677454 CTAC 9677451 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||| | ||||| || || | ||||||||||||||| ||||| |||||||| ||||| Sbjct 9675466 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9675407 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 9675406 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9675347 >seq19 Length=137426304 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| || || ||||| |||||||| |||||||| ||||| || || | ||| || Sbjct 98059015 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 98059074 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 ||||| ||||| | ||||| || || || ||||| ||||||||||| || |||||||| Sbjct 98059075 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 98059134 Query 50104 ACAAGTCTCTCTCC 50117 || | ||| || || Sbjct 98059135 ACCACTCTTTCCCC 98059148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715399774040360