Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq21 248 8e-61 seq5 114 1e-20 >seq21 Length=146407008 Score = 248 bits (274), Expect = 8e-61 Identities = 496/730 (68%), Gaps = 20/730 (3%) Strand=Plus/Plus Query 13360 ACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGT 13419 || ||||| | ||||| || || ||||| || ||||| ||||| || ||| |||| Sbjct 40656936 ACTCCCATCCTCTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGT-----CTTTCAGT 40656990 Query 13420 GATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGT 13479 || ||||| |||||||| || ||||| || | | || || || | |||| ||| Sbjct 40656991 GAAATATTCTCCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGT 40657050 Query 13480 TCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATA 13539 || | | ||| || || | ||||||||| ||||| ||||| | |||||||| Sbjct 40657051 TCCAGCATG--TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATC 40657108 Query 13540 CCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCG 13599 || || | || ||||| | | ||| | |||| | |||||| ||||| | | Sbjct 40657109 CCAATAGGCTTCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCATTG 40657168 Query 13600 TTTATAATAATCT-TAATAATGTC-ATTAGAAGGAGGATATTTTA---GATGTTTAAAAA 13654 ||||| || | | || | || | | | | || | | || | ||||| || | Sbjct 40657169 ---ATAATTATTTCTCTTACTCTCTACTCCA--GTGGTTTGTGTACCAGGTGTTTGAACA 40657223 Query 13655 TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATG 13714 | | || ||||||||||| || | ||||||||||| ||||||||||| || ||||||| Sbjct 40657224 TCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATG 40657283 Query 13715 TTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAA 13774 | | || ||||||| ||||||||| || | ||| ||||| | || || | || |||| Sbjct 40657284 TGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAA 40657343 Query 13775 AGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGT 13834 ||| | || || |||||||||| ||| | ||||| ||| | | || | ||||| Sbjct 40657344 AGA---TGCCTTCCGCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGT 40657400 Query 13835 TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTG 13894 ||||| ||||| || | || || || | | || ||| ||||| || | Sbjct 40657401 CCCCAATCCAGNGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGG 40657460 Query 13895 CATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTAT 13954 |||||| | | |||| | ||||| | | | ||||| || || |||| || |||| Sbjct 40657461 CATTGAGGAGAAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTAT 40657520 Query 13955 ACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14014 |||||||||| ||||||||||| || || || || || ||| | ||||| | ||||||| Sbjct 40657521 ACATTTCAGAATGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTG 40657580 Query 14015 ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAG 14074 | || || || | ||||| || ||||||||||||| || || |||||||| | Sbjct 40657581 TCATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTG 40657640 Query 14075 CTGCAAAAAA 14084 ||||||| || Sbjct 40657641 CTGCAAAGAA 40657650 Score = 150 bits (166), Expect = 2e-31 Identities = 295/431 (68%), Gaps = 5/431 (1%) Strand=Plus/Minus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || ||||| | ||| || | |||||||| || ||||||||||| || |||||||| | Sbjct 135420649 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 135420590 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 || ||||||| ||||||||| || | ||| ||||| || || || || |||||| | Sbjct 135420589 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGCAG 135420530 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 | | || ||| ||||||||| | ||||||||| | | | |||||| Sbjct 135420529 GTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCCATGGGTAACGTCTTTGTTCCCA 135420470 Query 13840 ATCCATTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898 ||||| | | || |||| | | || || || | | | ||||||||| || ||||| Sbjct 135420469 ATCCA-ATACAAGACCCAAACTGCCTTCTTCTTGA-CACAGGCATTGTTTCAATGGCATT 135420412 Query 13899 GAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 13958 ||| | | |||| | ||||| || | |||| ||| |||||||| | ||| || Sbjct 135420411 GAAGAGAAATTCCCTTTCTTTGTTATCTTTAATG--TGTGTCAATAAGGAGATTATTTAT 135420354 Query 13959 TTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCA 14018 ||||| ||||||||||||||||| | || || ||||| || || | ||||| Sbjct 135420353 GTCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTCTGTAAT 135420294 Query 14019 TTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGC 14078 || | || |||| ||| |||||||||||| || || ||||||| ||||| Sbjct 135420293 CTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCTGC 135420234 Query 14079 AAAAAATGCCA 14089 ||| || |||| Sbjct 135420233 AAAGAAAGCCA 135420223 >seq5 Length=126811233 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||||||||| || |||||||| || |||||||| | || ||||||| ||||||||| | Sbjct 9677574 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9677515 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||| ||||| | || || || ||||||||||| || || || ||||||||||| | Sbjct 9677514 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9677455 Query 13802 CTATTAGTCGTTCTCC 13817 ||| | ||||| || Sbjct 9677454 CTACGACACGTTCACC 9677439 Score = 84.2 bits (92), Expect = 2e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13370 || || ||| |||| || | |||| ||| || | || | | || || || ||||| | Sbjct 9679727 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 9679669 Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430 ||||| || | ||||| || ||||| |||||||| || ||||||||||| ||||| || Sbjct 9679668 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTTCCTTCCAGTGAAATATTCTC 9679609 Query 13431 CATAAAATCGAATGGATT 13448 |||||| || ||||| || Sbjct 9679608 CATAAAGTCAAATGGGTT 9679591 Score = 82.4 bits (90), Expect = 7e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 ||||| || |||||||| | |||||||||||||| ||||||||||| || || || || Sbjct 9675459 ATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGG 9675400 Query 13990 AAACCATAAAAACATCTAGCTTCTG 14014 || ||||| ||||| | ||||||| Sbjct 9675399 AAGCCATAGAAACAGCGGGCTTCTG 9675375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476677142844360