Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq21 329 4e-85 seq19 116 5e-21 seq6 114 2e-20 seq5 114 2e-20 >seq21 Length=146407008 Score = 329 bits (364), Expect = 4e-85 Identities = 640/939 (68%), Gaps = 26/939 (3%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| | || |||| |||||||| Sbjct 40656886 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACACCACTCCCATCC 40656945 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || | || | || || || || || ||||||| | ||| ||||| | Sbjct 40656946 TCTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGTCTTTC-----AGTGAAATATTCT 40657000 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 |||| || ||||| || || || | ||| || |||| |||| ||| || Sbjct 40657001 CCATAAAGTCAAATGGGTTCTCTACTCTGAAAACCTTGCTAAAACCCAGTTCCAGCATG- 40657059 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | || || || ||| ||||| | |||||||| || ||| | | Sbjct 40657060 -TCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATAGGCT 40657118 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | ||| |||| || |||| ||||| || || || | | || || Sbjct 40657119 TCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCATTGATAATTATTT 40657178 Query 42015 ATCTTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAA 42073 ||||||| | | || || | | | | | | | ||||| ||||||| || || ||| Sbjct 40657179 CTCTTACTCTCTACTCCAGTGGTTTG-TGTACCAGGTGTTTGAACATCAGGCAAGCAAAA 40657237 Query 42074 TCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATT 42133 || ||||| | |||||||||||| ||||| | ||| |||||||| ||||| || ||||| Sbjct 40657238 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATC 40657297 Query 42134 AGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 || || || || || ||||| ||||| || ||||| | |||||||||| | ||||| Sbjct 40657298 AGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGATG---CCTTCC 40657354 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 42250 |||| |||||| | | || | || ||| | | | | |||| ||||| Sbjct 40657355 GCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGTCCCCAATCCAGNGC 40657414 Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310 |||||||| |||||||| || ||||||||||||||||| |||||||| | |||| | Sbjct 40657415 AAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAGGAGAAAT 40657474 Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370 | |||| || |||||| | || || || | | | |||||||||||| ||||| Sbjct 40657475 TCCCTTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTATACATTTCAGAATGT 40657534 Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430 |||||||| ||||| || || || || ||||||| | ||| || || | ||| |||||| Sbjct 40657535 ATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTGTCATCTGAACTTCT 40657594 Query 42431 GTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCC 42490 | |||||| || | || ||||| || ||||| || ||||| |||||||| || || Sbjct 40657595 TGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAACC 40657654 Query 42491 AATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG----AT 42546 | ||||| |||||||| | | || | || || | ||||| || || || Sbjct 40657655 AGAACATGGGATATAAAATCTCTCTCCT-TGGGCTTCAGGGATTCC---CAGTGCCAAAT 40657710 Query 42547 ATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACAT 42606 || || || | || || || || | ||||| || || || || ||||| |||||||| Sbjct 40657711 GTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCGCCTTCTTATACAT 40657770 Query 42607 ATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | |||||| ||||| || | || ||||| || ||||| Sbjct 40657771 CTGCCAGATNTCATGGTACTCGATGGGGAAGATGACAAA 40657809 >seq19 Length=137426304 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || || | ||| |||||||| |||||||| ||||| || || | ||| || Sbjct 98059015 TCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 98059074 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||| ||||||| ||||| ||||| || ||||| ||||||||||| || |||||||| Sbjct 98059075 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 98059133 >seq6 Length=126788305 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || |||||||| || |||||| |||| |||| || || ||||| |||| Sbjct 66005053 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATAT 66005112 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| || || |||||||| ||||| || || || || || ||||| || | | || | Sbjct 66005113 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTCTCAGCTGCCATCTTGAGAACGGTTT 66005172 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 66005173 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 66005223 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||| ||||| ||||||||||||||||||||||| | || |||||||||| | ||| Sbjct 66016448 ACTCGCTTCATGAAGAGATCAGGAATCCAAAGAGCAAAGAAAAGATCTCTGGCACGCTGC 66016507 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 66016508 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 66016567 Query 72142 TCCAAGTATATGGC 72155 |||||||| || || Sbjct 66016568 TCCAAGTAAATAGC 66016581 Score = 105 bits (116), Expect = 9e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 66007901 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATG 66007960 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| |||| || |||||||| || || || ||||| || || | | || | Sbjct 66007961 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 66008020 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 66008021 CTGTTTCTTATACCAT 66008036 Score = 86.0 bits (94), Expect = 8e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440 |||| || || ||||| || | | | ||| || ||||| || || || | || |||| Sbjct 66011690 CATAGGTTTCATATGGGCCCTGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCGCCAT 66011749 Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500 ||||||| ||||| || |||| |||||| || ||| ||||| | || ||||| || | Sbjct 66011750 AATAAATAGTTTCAAAGATCTGCTTATTCAGTAATTGGGCTTCTGCACTCTCAAAAGGGT 66011809 Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560 | | | || ||||| || ||||| | ||||| || ||||| || || || | || | Sbjct 66011810 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 66011869 Query 71561 TCTTATTAGA 71570 ||||| || Sbjct 66011870 GTTTATTTGA 66011879 >seq5 Length=126811233 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| || || | ||| |||||||| ||||| || ||||| || || || || | Sbjct 9677574 CCTCATCTCTGCTGATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9677515 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || || ||||||||||| ||||| ||||| ||||||| Sbjct 9677514 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 9677455 Query 42207 C 42207 | Sbjct 9677454 C 9677454 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 42325 ATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGC 42384 |||||| | || || || || | ||||||||||||||| ||||| |||||||| ||||| Sbjct 9675466 ATCTTTTATGTAAGTGTCAATAAGAAGACTATACATTTCAGAATGTATGTTTTCCATGGC 9675407 Query 42385 CATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTC 42444 || || || || |||||||| | ||| || |||| ||| |||||| | |||||| || Sbjct 9675406 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 9675347 Score = 87.8 bits (96), Expect = 2e-12 Identities = 118/163 (72%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 41697 AAATATCGGCATTTAT---GTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTT 41753 ||||| ||||| | | ||| |||| |||||| |||| || | |||| ||| ||| Sbjct 9679753 AAATAAGGGCATATCTTCAGTTCATTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTG 9679694 Query 41754 CTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAG 41810 | || ||||| |||||||| | || || || || || | || || || || |||| Sbjct 9679693 TTGGACTTGACATCACTCCCATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAG 9679634 Query 41811 TCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATT 41853 |||||||||||| ||| ||||| ||||| || ||||| || || Sbjct 9679633 TCTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGGTT 9679591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668458426747240