Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq15 163 4e-36 seq147166 91.5 2e-14 >seq15 Length=160576332 Score = 163 bits (180), Expect = 4e-36 Identities = 192/260 (74%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| || |||| | || || || |||||||| ||||||||||||||||| ||| Sbjct 25967518 GCCAAGCGCCACCGCAAAGTGCTGCGCGACAACATCCAGGGAATCACCAAGCCAGCCATC 25967577 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || || ||||| || ||||| || ||||| |||| || | ||||||| |||| Sbjct 25967578 CGGCGCCTTGCTCGCCGCGGTGGCGTGAAGCGCATCTCCGGCCTCATCTATGAGGAGACC 25967637 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | ||||| ||| ||| |||| || || | ||| || ||| Sbjct 25967638 CGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCCGTGACCTACACGGAG 25967697 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| |||||| ||||||| | |||||||| |||| || || ||| Sbjct 25967698 CACGCCAAGCGCAAGACGGTCACCGCCATGGACGTAGTCTATGCGCTGAAGCGCCAGGGC 25967757 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | |||||||||| || Sbjct 25967758 CGCACCCTTTATGGTTTCGG 25967777 Score = 161 bits (178), Expect = 2e-35 Identities = 194/262 (74%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| | | || || || || ||||||||||||||||||||||| | Sbjct 25291702 CGCCAAGCGTCACCGCA-AGGTGTTGCGCGACAATATCCAAGGAATCACCAAGCCAGCCA 25291644 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| || |||||||| || || || ||||||||| | |||||| | ||||||| |||| Sbjct 25291643 TCCGGCGCCTGGCTCGCCGCGGCGGCGTCAAGCGTATTTCTGGACTCATCTATGAGGAGA 25291584 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | || ||||| | ||||| | | || |||| |||||| || ||| || | Sbjct 25291583 CTCGYGGAGTGCTGAAGGTTTTCCTGGAAAATGTAATCCGCGATGCTGTCACCTACACAG 25291524 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| ||||| ||||| ||||| ||||||| | || || || | || || || | Sbjct 25291523 AGCACGCCAAACGCAAGACGGTCACAGCCATGGACGTGGTGTACGCGCTCAAGCGCCAGG 25291464 Query 16671 GCCGTAAGATTTATGGTTTTGG 16692 | || | | ||||| || || Sbjct 25291463 GACGCACTCTGTATGGCTTCGG 25291442 Score = 156 bits (172), Expect = 7e-34 Identities = 191/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| | | || || |||||||| || ||||| |||||||| || Sbjct 25381032 CGCTAAGCGTCACCGCAAGGTTTTGCGCGACAACATCCAGGGCATCACTAAGCCAGCCAT 25380973 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || || |||||||| || || ||||||||| | ||||| | ||||||| |||| Sbjct 25380972 CCGACGCCTTGCTCGTCGCGGCGGTGTCAAGCGTATTTCTGGGCTTATCTATGAGGAGAC 25380913 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||| | |||| ||||| | || | ||| ||| || | |||||| || || || || Sbjct 25380912 TCGCGGTGTTCTGAAGGTGTTTTTGGAGAACGTGATTCGTGATGCAGTCACTTACACGGA 25380853 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| ||||| ||||| || || | |||||| | |||||||| |||| || || || Sbjct 25380852 ACACGCCAAACGCAAGACCGTAACAGCAATGGATGTAGTCTATGCGCTGAAGCGACAGGG 25380793 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | |||| || || || Sbjct 25380792 ACGCACTCTTTACGGCTTCGG 25380772 Score = 150 bits (166), Expect = 3e-32 Identities = 200/278 (72%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | | || || ||||| |||||||| || |||||||| ||||| Sbjct 25133190 GCCAAGCGTCACCGGAAAGTGCTGCGGGATAATATCCAAGGCATTACCAAGCCGGCTATT 25133131 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || || ||| | |||||||| || || || ||||||| ||| | || || |||| Sbjct 25133130 CGGCGCCTTGCTAGACGTGGTGGGGTTAAACGAATCTCTGGTTTGATTTACGAGGAGACC 25133071 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | |||| | ||| | || || ||| ||| |||| || || | |||||| ||| Sbjct 25133070 CGAGGTGTTCTCAAGGTTTTTCTGGAGAACGTGATCCGGGACGCGGTGACCTATACGGAG 25133011 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||||||||| |||||||| | || || || | || || ||||| Sbjct 25133010 CACGCCAAGCGCAAGACTGTCACTGCCATGGATGTGGTTTACGCGCTCAAGCGCCAAGGA 25132951 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATCA 16710 || | | || ||||| || |||||| || || ||| Sbjct 25132950 CGCACTCTATACGGTTTCGGTGGTTAATATTTTAGTCA 25132913 >seq147166 Length=686 Score = 91.5 bits (100), Expect = 2e-14 Identities = 84/104 (81%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||||||||| || ||| | |||||||||||||| || || |||||||| || | Sbjct 582 CGCCAAGCGTCATCGTAAGGTCT-TGCGAGATAACATCCAGGGTATTACCAAGCCTGCCA 640 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGA 16534 | || ||||| ||||| || || || ||||||||| | |||||| Sbjct 641 TTCGGCGTCTTGCTCGGCGCGGCGGTGTCAAGCGTATTTCTGGA 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78783034112457