Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6 96.9 9e-15 seq21 91.5 4e-13 >seq6 Length=126788305 Score = 96.9 bits (106), Expect = 9e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || || | || ||||| || || |||||| Sbjct 66014981 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAAACAGAAACAGGCACCCCGTATATG 66014922 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||||||||| || || || ||| |||||||||| |||| || || || | Sbjct 66014921 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACCATCAAATGC 66014862 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || || | || |||||| Sbjct 66014861 AGCAACCTGTGCACAGAAATAGTGGAGTACACC 66014829 >seq21 Length=146407008 Score = 91.5 bits (100), Expect = 4e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491 ||||| |||||||||||||| || ||||| | |||| || | | | | ||| Sbjct 40657437 AAGAAGAAGGCAGATTGGGCCTTGCNCTGGATTGGGGACAAAGANGCTACCTGTGGTGAA 40657378 Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-CAAT 22550 ||| || | | ||||||| | |||||||| ||||||||| |||||| | || Sbjct 40657377 CGTGTTGTAGTCTTTGCTGCAGCGGAAGGCAT---CTTTTCTGGTT-ATTTTGCATCGAT 40657322 Query 22551 CTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAG 22610 || ||||| || ||||| | | | ||||| || || || ||||| ||||| | ||||| Sbjct 40657321 ATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAG 40657262 Query 22611 CCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 | ||||||||||| | || |||||||| || Sbjct 40657261 CAGAGATGAGGGTTTACACTGTGATTTTGCTTG 40657229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1298017381587318