Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10]
319,549 sequences; 3,011,966,170 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq20 98.7 9e-16
seq1 95.1 1e-14
seq16 87.8 2e-12
>seq20
Length=124503471
Score = 98.7 bits (108), Expect = 9e-16
Identities = 152/214 (71%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| || ||||| || ||||| ||||| | || || ||| ||||||| | || ||
Sbjct 36580437 ACGCAAACATGCAGATCTTTGTGAAGACCCTCACGGGCAAAACCATCACCCTTGAGGTCA 36580378
Query 25051 AGTCGTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTC 25107
|| | |||||| || ||| | || |||| |||| ||| || || || || || |
Sbjct 36580377 AGCCCAGTGACACCATTGAG--AATGTCAAAGCCAAAATTCAA-GATAAGGAGGGTATCC 36580321
Query 25108 CACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGG 25167
|||||||||| ||||| | || |||||||||||||| | ||||||| |||||| |
Sbjct 36580320 CACCTGACCAGCAGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCT 36580261
Query 25168 GCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
|| ||||| || || ||| | ||||| || ||
Sbjct 36580260 CAGACTACAACATCCAGAAAAAGTCCACCCTGCA 36580227
>seq1
Length=215897965
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/213 (71%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| || ||||| || ||||| ||||| | || || ||| ||||||| | || || |
Sbjct 203081952 ACGCAAACATGCAGATCTTTGTGAAGACCCTCACAGGCAAAACCATCACCCTTGAGGTTG 203082011
Query 25051 AGTCGTCTGACACTATCGAG--TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCC 25108
|| | |||||| || ||| | || |||| |||| ||| |||| || || || ||
Sbjct 203082012 AGCCCAGTGACACCATTGAGAATGACA-AAGCCAAAATTCAAC-ACAAGGAGGGTATCCC 203082069
Query 25109 ACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGG 25168
||||||||| ||| | || |||||||| ||||| | ||||||| |||||| |
Sbjct 203082070 ACCTGACCAGTAGCATCTGATATTTGCCGGTAAACAGCTGGAAGATGGCCGCACTCTCTC 203082129
Query 25169 CGATTACAATATTCAAAAAGAATCCACGCTACA 25201
|| ||||| || || ||||| ||||| || ||
Sbjct 203082130 AGACTACAACATCCAGAAAGAGTCCACCCTGCA 203082162
>seq16
Length=174288623
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/215 (69%), Gaps = 8/215 (4%)
Strand=Plus/Plus
Query 24991 ACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGG 25050
||| || ||||| || ||||| ||||| | || ||| ||||||| | || || |
Sbjct 78464589 ACGCAAACATGCAGATCTTTGTGAAGACCCACATGGGCAAAACCATCACCCTTGAGGTCG 78464648
Query 25051 AGTCGTCTGACACTATCGAG----TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATT 25106
|| | |||||| | ||| ||| ||| |||| ||| ||||| || || ||
Sbjct 78464649 AGCCCAGTGACACCACTGAGAACGTCA---AAGTCAAAATTCAA-GACAAGGAGGGTATC 78464704
Query 25107 CCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTG 25166
||||||||||| |||| | || |||||||| ||||| | ||||||| |||||| |
Sbjct 78464705 CCACCTGACCAGCAGCNTCTGATATTTGCCGGNAAACAGCTGGAAGATGGCCGCACTCTC 78464764
Query 25167 GGCGATTACAATATTCAAAAAGAATCCACGCTACA 25201
|| ||||| || || ||||| ||||| || ||
Sbjct 78464765 TCAGACTACAACATCCANAAAGAGTCCACCCTGCA 78464799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 431640402614435
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |