Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq21 149 1e-30 seq19 84.2 4e-11 seq5 84.2 4e-11 >seq21 Length=146407008 Score = 149 bits (164), Expect = 1e-30 Identities = 390/586 (67%), Gaps = 17/586 (3%) Strand=Plus/Minus Query 42285 ATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCC 42344 |||||| |||| || |||||| ||||| ||||||||| | ||| |||||||||| Sbjct 40657794 ATCGAGTACCATGANATCTGGCAGATGTATAAGAAGGCGGANGCTTCCTTCTGGACCGCC 40657735 Query 42345 GAGGAGATTGACCTGGCCAAGGACAC--GGCCGGCTGGGAGTCACTGTCTGAGAACGAAA 42402 |||||| | |||||| ||||||||| ||| |||||| || ||| || || | Sbjct 40657734 GAGGAGGTGGACCTGTCCAAGGACATTTGGCA--CTGGGAATCCCTGAAGCCCAAGGAGA 40657677 Query 42403 -AGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAG 42461 || |||| | | | |||| ||||| || || ||| |||||||| ||||| Sbjct 40657676 GAGATTTTA-TATCCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAA 40657618 Query 42462 AACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGC 42521 ||| ||| | || | |||| || ||| || || ||||| |||| ||| Sbjct 40657617 AACTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTNTGGC 40657558 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACG 42578 ||||| || ||||| || ||| | || ||||| |||| | | || | |||| Sbjct 40657557 TTCCAAATTGCCATNGAAAACATACATTCTGAAATGTAT---AGTTTCCTTACAGACACT 40657501 Query 42579 TACATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGC 42638 ||||| |||||| || | | || |||| ||||| || |||||||| || Sbjct 40657500 TACATAAAAGATCCCAAAGAAAGGGAATTTCTCCTCAATGCCATTGAAACGATGCCTTGT 40657441 Query 42639 ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGC 42698 ||||||||||||| || ||||| | |||||| | | || || || | || Sbjct 40657440 GTCAAGAAGAAGGCAGATTGGGCCTTGCNCTGGATTGGGGACAAAGANGCTACCTGTGGT 40657381 Query 42699 GAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCC 42758 || | | |||| |||| | || | || |||||||| |||| || || || || Sbjct 40657380 GAACGTGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTT-TTCT--GGTTATTTTGCATCG 40657324 Query 42759 ATCTTCTGGCTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817 || |||||||||||| | ||| | |||||| || ||||| || || || ||||| || Sbjct 40657323 ATATTCTGGCTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACTTAT 40657265 Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC 42863 ||||| || ||||| | || | || ||||| ||||| ||||| Sbjct 40657264 TAGCAGAGATGAGGGTTTACACTGTGATTTTGCTTGCCTGATGTTC 40657219 >seq19 Length=137426304 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Minus Query 42706 TGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCT 42765 |||| |||||| | || || || || || |||||||| || | || || | || |||| Sbjct 98059138 TGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCAGGATCTTTTGCTGCTATATTCT 98059079 Query 42766 GGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGG 42824 |||| ||| ||| |||| | ||||| |||||||| || || || |||||||||||||| Sbjct 98059078 GGCTAAAGAAGAGAGGTCTT-ATGCCAGGACTCACTTTTTCCAATGAACTCATCAGCAGA 98059020 Query 42825 GACGA 42829 || || Sbjct 98059019 GATGA 98059015 >seq5 Length=126811233 Score = 84.2 bits (92), Expect = 4e-11 Identities = 95/125 (76%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 ||||||||| | || || || ||||||||||| || || | || || || || |||||| Sbjct 9677451 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 9677510 Query 42768 CTCAAG-CAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGA 42826 |||||| | ||| | |||||| || ||||| || || || ||||| |||||||| || Sbjct 9677511 CTCAAGAAACGAGGACT-GATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 9677569 Query 42827 CGAGG 42831 |||| Sbjct 9677570 TGAGG 9677574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 940567166912240