Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq13 132 1e-25 seq21 125 2e-23 seq8 122 2e-22 seq20 107 5e-18 seq9 102 2e-16 seq14 93.3 1e-13 seq2 93.3 1e-13 >seq13 Length=81577475 Score = 132 bits (146), Expect = 1e-25 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| || || ||||| ||||| ||||| | Sbjct 45553214 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 45553273 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 45553274 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 45553333 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 45553334 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACC 45553393 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 45553394 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 45553444 >seq21 Length=146407008 Score = 125 bits (138), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | | ||||||| || || || || ||||| ||||| | Sbjct 111222762 CCACCACGAAGTCTCAACNCAAGATGAAGAGTAGACTCCTTNTGAATATTGTAGTCAGAC 111222703 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 111222702 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 111222643 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| ||| | ||| || Sbjct 111222642 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCAACC 111222583 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| | ||||| || ||||| ||||||||| || Sbjct 111222582 TCGAGGGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCATTTTG 111222532 Score = 86.0 bits (94), Expect = 1e-11 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || |||| | | || ||||| ||||| | ||| | || || ||| Sbjct 1220582 TCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTCGCCAGCAAAG 1220523 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| | || |||||||| ||||||||||| || || || || ||| Sbjct 1220522 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 1220463 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 ||| | ||| | ||| || || || ||||| |||||||| | || || || || Sbjct 1220462 TCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCCCTTAGGGTTTTCACA 1220403 Query 288463 AATATCTGCATTATG 288477 || |||||||| || Sbjct 1220402 AAAGTCTGCATTTTG 1220388 >seq8 Length=70300957 Score = 122 bits (134), Expect = 2e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 14508825 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 14508884 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||||||||| |||||||| || || || ||| Sbjct 14508885 ATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATTTTGGCCTTTACATTT 14508944 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 14508945 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 14509004 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 14509005 AAGATCTGCATTTTG 14509019 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 14508369 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 14508428 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||||||||| ||||| || || ||||| ||| Sbjct 14508429 ATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTGGCCTTCACATTT 14508488 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 14508489 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 14508548 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 14508549 AAGATCTGCAT 14508559 Score = 118 bits (130), Expect = 2e-21 Identities = 143/194 (74%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 14508597 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 14508656 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | ||| || || ||| || ||||| |||||||||||||| || || || Sbjct 14508657 ATGAGCCTCTGCTGG---TCGGGGGGAATGCCTTCCTTATCCTGGATTTTGGCCTTYACA 14508713 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 ||||| || | || || | || || || || ||||| ||||| |||||||| ||||| Sbjct 14508714 TTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTC 14508773 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 14508774 ACGAAGATCTGCAT 14508787 >seq20 Length=124503471 Score = 107 bits (118), Expect = 5e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 288285 TTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGAT 288344 ||| ||||| || ||||| | ||| ||||| || ||||| | ||||| || || || || Sbjct 36580241 TTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATAT 36580300 Query 288345 CAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTC 288404 ||||||||| || | |||||| || || ||||| || ||||| ||||| || || || Sbjct 36580301 CAGACGCTGCTGGTCAGGTGGGATACCCTCCTTATCTTGAATTTTGGCTTTGACATTCTC 36580360 Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || | | || || || ||||| || || || || || ||||| || || Sbjct 36580361 AATGGTGTCACTGGGCTTGACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAA 36580420 Query 288465 TATCTGCAT 288473 |||||||| Sbjct 36580421 GATCTGCAT 36580429 >seq9 Length=88628999 Score = 102 bits (112), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | | ||||||| || || ||||| ||||| ||||| | Sbjct 60029911 CCACCANGAAGTCTCAACGCAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGAC 60029852 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| | ||| || || || |||||| | || | || | || Sbjct 60029851 AAAGTCCATCCATCTTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTAAGCAGGAGGA 60029792 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 60029791 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACC 60029732 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| |||||||| | || || || | ||| ||||||||| || Sbjct 60029731 TCAAGGGTGATGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 60029681 >seq14 Length=179790006 Score = 93.3 bits (102), Expect = 1e-13 Identities = 160/231 (69%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 178100659 CCACCAGGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGAC 178100600 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || | | ||| ||||| | ||| || || || |||||||| | || | | | || Sbjct 178100599 AG--TACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTNTGCTNATCAGGAGGA 178100542 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||||||| ||||||||||| || || || || |||||||| | ||| | || || Sbjct 178100541 ATTCCTTNCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCACAGGTTTGACC 178100482 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| |||| |||||||| || || | || | ||| |||||| || || Sbjct 178100481 TCGAGGGTGACGGTCTTCCCCGTAAG-GATTTTATGAAAATCTGCGTTTTG 178100432 >seq2 Length=86128551 Score = 93.3 bits (102), Expect = 1e-13 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTA 288378 ||||| ||||| || || || |||||||| | || ||| | || |||||||| ||| Sbjct 25049932 TCTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTA 25049991 Query 288379 TCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATC 288438 |||||||| || || || || |||||| | | || | ||| || || || ||||| Sbjct 25049992 TCCTGGATATTGGCCTTTACATTTTCTGTTGTATTCAAGGGTTCAACCTCAAGGGTGATG 25050051 Query 288439 GTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || || || || || ||||| ||||||||| Sbjct 25050052 GTCTTACCTGTAAGGGTTTTCACGAAAATCTGCATT 25050087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174824633519222