Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq20 113 5e-20 seq8 109 6e-19 seq1 109 6e-19 seq16 107 2e-18 seq15 93.3 5e-14 >seq20 Length=124503471 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||||||||| |||| ||| || || || || ||||| || | ||||| || | Sbjct 36580215 CGCAACACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCA 36580274 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||| || || || ||||| || ||||||||||| | ||| | | |||||| Sbjct 36580275 TCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTA 36580334 Query 42114 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 | | ||| |||| | ||||| || | | ||||| || | | || || | ||||| Sbjct 36580335 T-CTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTTGACCTCAAGGGTGAT 36580393 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 |||||||||||| || ||||| |||||||| ||||| || Sbjct 36580394 GGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 36580432 >seq8 Length=70300957 Score = 109 bits (120), Expect = 6e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||||| |||| |||| || |||||| || || ||||| |||| Sbjct 14508560 ACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 14508619 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || |||||||| || || || ||||| | ||||||||||| || Sbjct 14508620 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 14508679 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||||| ||| |||||| || | | | | ||||| || | ||||| Sbjct 14508680 AATGCCTTCCTTATCCTGGATTTTGGCCTTYACATTTTCGATGGTGTCACTGGGCTCCAC 14508739 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 14508740 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14508787 Score = 107 bits (118), Expect = 2e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| ||||| | ||||| |||| |||| || |||||| || || ||||| |||| Sbjct 14508788 ACCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 14508847 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| || | || || |||||||| || || || ||||| | ||||||||||| || Sbjct 14508848 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGG 14508907 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || || || || |||||| || | | | | ||||| || | ||||| Sbjct 14508908 GATGCCTTCTTTATCTTGGATTTTGGCCTTTACATTTTCGATGGTGTCACTGGGCTCCAC 14508967 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 || | |||||||| ||||| || || ||||| || ||||| |||||||| || Sbjct 14508968 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTGAC 14509021 Score = 86.0 bits (94), Expect = 7e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| |||| |||| || |||||| || || ||||| |||| ||||| || | Sbjct 14508345 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 14508404 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| || || || ||||| | ||||||||||| || | || || || Sbjct 14508405 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTA 14508464 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 || ||| || || | | | | ||||| || | ||||| || | |||||| Sbjct 14508465 TCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14508524 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || || ||||| || ||||| ||||| Sbjct 14508525 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14508559 >seq1 Length=215897965 Score = 109 bits (120), Expect = 6e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||||||||| |||| ||| ||| || || || ||||| || | ||||| || | Sbjct 203082174 CGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCA 203082115 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||| ||||| || ||||| || ||| |||||| | ||| | | ||||||| Sbjct 203082114 TCTTCCAGCTGTTTACCGGCAAATATCAGATGCTACTGGTCAGGTGGGATACCCTCCTTG 203082055 Query 42114 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 | ||| |||| | |||| || | | ||||| || | || || || | ||||| Sbjct 203082054 TGT-TGAATTTTGGCTTTGTCATTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGAT 203081996 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 ||||||||| || || ||||| |||||||| ||||| || Sbjct 203081995 GGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATGTT 203081957 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 132245955 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 132245896 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 132245895 ATACTAACGAGGA 132245883 >seq16 Length=174288623 Score = 107 bits (118), Expect = 2e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||||||||| |||| ||| ||| || || || ||||| || | ||||| || | Sbjct 78464811 CGCAACACCAGGTGCAGGGTGGACTCTTTNTGGATGTTGTAGTCTGAGAGAGTGCGGCCA 78464752 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || ||||| || || || ||||| || |||||||||| | ||| | | ||||||| Sbjct 78464751 TCTTCCAGCTGTTTNCCGGCAAATATCAGANGCTGCTGGTCAGGTGGGATACCCTCCTTG 78464692 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 || ||||| ||||| || | ||||| || | || || || | |||||| Sbjct 78464691 TCTTGAATTTTGACTTTGACGTTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATG 78464632 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 ||||||||| | | ||||| |||||||| ||||| || Sbjct 78464631 GTTTTGCCCATGTGGGTCTTCACAAAGATCTGCATGTT 78464594 >seq15 Length=160576332 Score = 93.3 bits (102), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57003 TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 57062 |||||||| || | | ||| |||||| ||||||||||||||||||||| ||||||||| Sbjct 26271038 TTTTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 26270979 Query 57063 ACTATACTACCGAGGA 57078 ||||||||| |||||| Sbjct 26270978 ACTATACTAACGAGGA 26270963 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 26247035 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26246976 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 26246975 TACTAACGAGGA 26246964 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 26347014 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 26347073 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 26347074 TACTAACGAGGA 26347085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541043011162160