Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 seq8 89.7 5e-13 seq20 87.8 2e-12 seq6 82.4 8e-11 >seq1 Length=215897965 Score = 91.5 bits (100), Expect = 1e-13 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||| ||| ||||| || | || | | | ||||| || || ||||||||||| Sbjct 203082187 GCCACCTTGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 203082128 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || || || || |||||||||| | | || ||| ||| ||||| || || Sbjct 203082127 GAGAGTGCGGCCATCTTCCAGCTGTTTACCGGCAAATATCAGATGCTACTGGTCAGGTGG 203082068 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564 ||||| || |||| | ||| |||| | || | ||| || | |||||| | | ||| Sbjct 203082067 GATACCCTCCTTGT-GTTGAATTTTGGCTTTGTCATT-CTCAATGGTGTCACTGGGCTCA 203082010 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| | || | ||||| || || || || || ||||| ||||||||| Sbjct 203082009 ACCTCAAGGGTGATGGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATG 203081959 >seq8 Length=70300957 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || ||||| || | || | | | |||||||| || ||||||||||| Sbjct 14508789 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 14508848 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || || || || | | |||| || | ||| ||||| || || Sbjct 14508849 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 14508908 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || |||||||| || |||||| |||| | ||| | |||||| | | ||||||| Sbjct 14508909 ATGCCTTCTTTATCTTGGATTTTGGCCTTTACATTTTCGATGGTGTCACTGGGCTCCACC 14508968 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || || ||||| || || || || |||||||| Sbjct 14508969 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14509015 >seq20 Length=124503471 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||||| ||||| || | || | | | |||| || || ||||||||||| Sbjct 36580202 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTTTTTCTGGATGTTGTAGTCTGA 36580261 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || || || || ||||| |||| | | || |||||||| ||||| || || Sbjct 36580262 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 36580321 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || || || ||| |||| | ||| | | || | |||||| | | || | Sbjct 36580322 GATACCCTCCTTATC-TTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTTGA 36580380 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||||| || || || || || ||||| ||||||||| Sbjct 36580381 CCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATG 36580430 >seq6 Length=126788305 Score = 82.4 bits (90), Expect = 8e-11 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 153640 TGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGAT 153699 |||||| ||| || || | ||| |||||||||||||| ||| |||| || ||||| | Sbjct 66014831 TGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGGT 66014890 Query 153700 TGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGG 153739 |||| || ||||| || | |||||| ||||||| ||||| Sbjct 66014891 TGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGG 66014930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494280148079280