Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13 104 2e-17 seq21 96.9 3e-15 seq8 91.5 1e-13 seq7 87.8 2e-12 seq16 86.0 6e-12 >seq13 Length=81577475 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| | | || |||||| | ||| | |||||||| |||||||||||||| || Sbjct 45553211 GCACCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCA 45553270 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || || || || ||||| |||||| || |||||||| ||| Sbjct 45553271 GACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 45553330 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | || |||| || Sbjct 45553331 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCA 45553390 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||| | || || || || || ||||| || ||||||||||| Sbjct 45553391 ACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 45553440 >seq21 Length=146407008 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||| | | ||| | |||||||| || ||||||||||| || Sbjct 111222765 GCACCACCACGAAGTCTCAACNCAAGATGAAGAGTAGACTCCTTNTGAATATTGTAGTCA 111222706 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || || || || ||||| |||||| || |||||||| ||| Sbjct 111222705 GACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 111222646 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | | |||| || Sbjct 111222645 GGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGAGGGTTCA 111222586 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||| | || || || | |||||||| || ||||||||||| Sbjct 111222585 ACCTCGAGGGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 111222536 >seq8 Length=70300957 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | || ||||| || || || ||||| || | ||||| | Sbjct 14508573 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 14508632 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | | |||||| ||||| || ||||| ||||| Sbjct 14508633 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTA 14508692 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| |||||| ||| | | ||||| |||||| | ||| || || | ||| | Sbjct 14508693 TCCTGGATTTTGGCCTTYACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14508752 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || || || || |||||||| Sbjct 14508753 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14508787 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||| |||| || | || ||||| || || || ||||| || | ||||| | Sbjct 14508801 CGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 14508860 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || |||| | | |||||| ||||| || ||||| || || Sbjct 14508861 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTA 14508920 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || |||||| ||| | | ||||| |||||| | ||| || || | ||| | Sbjct 14508921 TCTTGGATTTTGGCCTTTACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 14508980 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||||||||| || || || || |||||||| Sbjct 14508981 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14509015 >seq7 Length=99894491 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | |||||||| |||||||||||||| || Sbjct 60057472 GCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCA 60057531 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 || || || ||| || || || | ||||| |||||| || |||||||| ||| Sbjct 60057532 GACAAAGTACGTCCATCTTCCAGTTGCTGGCCAGCAAAGATCAGTCTTTGCTGATCAGGA 60057591 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063 || || || ||||| ||| ||| || ||| | | ||| | || |||| || Sbjct 60057592 GGAATTCCTTCCTTCTCCTGGATCTTGGCCTTTATATTTTCTATCGTATCCGAGGGTTCA 60057651 Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGC 127111 || || | ||| | || | || | || ||||| || ||||||||| Sbjct 60057652 ACCTCAAGGGTGATGGTCTGCCCCATAAGGGTTTTCACGAAAATCTGC 60057699 >seq16 Length=174288623 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 |||||||||| || | || |||||||| || || ||||| || | ||||| | Sbjct 78464811 CGCAACACCAGGTGCAGGGTGGACTCTTTNTGGATGTTGTAGTCTGAGAGAGTGCGGCCA 78464752 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || |||||||| || || | |||| ||||||| || || || || ||||||||| Sbjct 78464751 TCTTCCAGCTGTTTNCCGGCAAATATCAGANGCTGCTGGTCAGGTGGGATACCCTCCTTG 78464692 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 || ||||| |||| | || |||||| | |||||| || | ||| | Sbjct 78464691 TCTTGAATTTTGACTTTGACGTTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTGATG 78464632 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||||||| | | || || ||||| ||||||||| Sbjct 78464631 GTTTTGCCCATGTGGGTCTTCACAAAGATCTGCATG 78464596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473601477435760