Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq1 188 1e-42 seq7 122 1e-22 >seq1 Length=215897965 Score = 188 bits (208), Expect = 1e-42 Identities = 176/224 (79%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 || || ||||||||||| |||||||||||||| || || ||||| || |||||||| || Sbjct 173589587 GTCTGGAACAACTGCTCATCACCCCATTCCGGATGCTCCTGTTTAAGCACATCGCACACT 173589528 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 ||||||||||| | |||||| || ||||| |||||||| | ||| ||||| | |||||| Sbjct 173589527 CTGTTGTGTTCCCGCAGCCAGATTGTGGCATACATCATCAGACCAGGCACCAGACCAAAG 173589468 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 || || | |||||| ||||| ||||||| || || |||| || | || | ||| | Sbjct 173589467 ACCTCCTGCCCCACAGCAAACCGCAGATGCTCAGGGACTTGAGGAGGGTAGATCATCTCT 173589408 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 |||| || |||||||| ||||| |||||||| || || ||||| Sbjct 173589407 GCCTGAGTATCTTTGACTGTGGGAGGATACATCTCTCCATCAAT 173589364 Score = 172 bits (190), Expect = 8e-38 Identities = 209/285 (73%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 8891 AACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATG 8950 || || || |||||||| || || ||||| |||||||| | || || || | ||| Sbjct 173591605 AAGGGGCAGCCCTTCACGTTATTGCAGATGAGAGACTGAATTGAGGCAGTGTTGATGATT 173591546 Query 8951 TCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACG 9010 | ||||| || || || || || ||||| || |||||||| || || || || || || Sbjct 173591545 TGAAAACCCACTTCTCCACCAAAAGTGCTTGGCTTCCAGTAGGCAGGAGAACATATAACA 173591486 Query 9011 TTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAG 9070 || |||| || ||||||||||| ||||| || || | || | ||| ||||||| ||| Sbjct 173591485 TTACCCATAAGTCCTTTCAAGGAGAACGGTGCTCCAACTTCTACCATGGTCTCACCAAAG 173591426 Query 9071 ATGGCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACG 9130 |||||| | ||||| || ||||| || | | | ||| || || || ||||| |||| | Sbjct 173591425 ATGGCATCTGGACGAGGCTTTTCTACCAGAAGGGCAGGATACAGCTCCACAGCATCGATG 173591366 Query 9131 TCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 || || ||||| ||||||||||| |||| || ||||| || ||| Sbjct 173591365 TCACCGTAGAGTGCTTCCAACTCTGCAGACATTTCCTTTTCTCCT 173591321 Score = 134 bits (148), Expect = 2e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| |||| ||| | |||||||| || |||||| ||| ||| | || Sbjct 173588435 TCTTACCCCATGGCCCAGCCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 173588376 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 ||| || || || ||||| || | || || |||||||||| ||| |||||||||||||| Sbjct 173588375 AAACTGATGCGTGAAGTGCTGGGCAAAGAATGCGAACATCATGTTTGTGCCCTGGGGATC 173588316 Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAGACG 10300 ||||| ||| | || | | || || ||| |||||||||| ||||||| || || | Sbjct 173588315 AGGGATGAAGTTTCTTCTTAGAAGAAATTTTTCCACAATCTCATTTGAATCAGGAAGCTG 173588256 Query 10301 CGCCTTACCTGA 10312 | ||||||||| Sbjct 173588255 CTTCTTACCTGA 173588244 Score = 122 bits (134), Expect = 1e-22 Identities = 117/150 (78%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | ||||| ||||||||| ||| || ||||| || | ||| ||| Sbjct 173587824 TCACCTTTCACACCCAAGGGAGTCGGGCAGTCATCAGGCACAGGAGGAAGGGCTCTGGTA 173587765 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || || || ||||||||||| ||||||||||| || | ||||| Sbjct 173587764 TAATAGGAGAGGTTAGAGAAGGCTTCCCAGCTTTTGTAGCCATAGTCAACATTGTAAGTT 173587705 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || ||||||||||||| | || |||||| Sbjct 173587704 GGTGGACTGTCAATCAAATGTGATCTGGCT 173587675 Score = 102 bits (112), Expect = 1e-16 Identities = 193/284 (68%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 || ||||| || | ||||| |||||||| || ||||| ||||| || | | | || Sbjct 173590171 CCAGCAATTTGCTTGGTGAATGATTCAACAAACTGGGCAATTCCATGTTCCAGTAATATA 173590112 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||||| | || |||| || || ||| ||| || |||| ||| Sbjct 173590111 GAGTTGTTGTAGATAAACTGTTGATAGTTGTATTTCTGGTCATGAATTTGAAAGGTGTCA 173590052 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| || | ||||||| | ||||||||||| ||||| || || || || || |||||| Sbjct 173590051 GGCAGAAGGGGATGCCAGTGATAGAGGGTATTAAACTCAGCAGCAATACGATTTTGGTAC 173589992 Query 9616 TGAAAGGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGCTG 9675 || || | ||| |||| || |||||||| | || | |||||| || || || Sbjct 173589991 TGGAATTGTTTGTTGAAAAGTAGTTCTGGGTCAAATTTCAGTTTGAAGTGATAGCCACTC 173589932 Query 9676 AGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | ||||| ||||| | | || | ||| ||||| || || || Sbjct 173589931 AAGTGCTGTACATAATCTTCAATCACAATCTTAATAGTCTCTCC 173589888 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 10840 CTTACGGGTCGAACAGTGCCGATCATAAAACCCCGTCCGCGTACAATCGCACCAATAACG 10899 |||||| || || |||| | |||| || || ||||| |||||||||||| ||| | Sbjct 173586762 CTTACGTGTTGAGCAGTTTTCACCATAGAATCCTGTCCGGGTACAATCGCACTTATATTG 173586703 Query 10900 ATCAAACCCCACCGTCATGCATACCCCTCGATTCTGGCACGGGTGCGAACAGCAAGGGTT 10959 ||||| ||||| |||| ||||| ||||| || || || |||| ||||||||||| || Sbjct 173586702 GTCAAATCCCACACTCATACATACACCTCGGTTTTGACATGGGTAGGAACAGCAAGGATT 173586643 Query 10960 GGCTGCAATTTAA 10972 ||| ||||| || Sbjct 173586642 TGCTACAATTAAA 173586630 >seq7 Length=99894491 Score = 122 bits (134), Expect = 1e-22 Identities = 178/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Minus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 || || || || ||||||| || || | || ||||| || ||||| || ||||||||| Sbjct 62605921 GTGGCCGTCTTGACGATGTTAAAGCCCATCTCGCCGCCAAATGTGCTCGGCTTCCAGTAC 62605862 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 |||| || |||||| ||| | | ||| || || | |||||| |||||||| | ||| Sbjct 62605861 TCCGGAGAACAGATGGGATTCCCTAGGAGACCCTTGAGGGAAAAGGGAGCCCCAATCTCT 62605802 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCC-AGTGTA 9111 || || ||||| || ||||| | ||| | ||||| | || | |||| || ||| Sbjct 62605801 ATCATACTCTCCCCAAAGATAGAGTTTGGATGGCACTTTTCAA-GAAGCAGCCCAGGGTA 62605743 Query 9112 GAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTC 9171 || || | || || | ||| ||||| || | |||||||| || || ||||||||||| Sbjct 62605742 GAACTCCAACGCATCAATGTCTCCATACAGCTCCTCCAACTCCGCTGCCATCTCCTTCTC 62605683 Query 9172 ACCTACAAG 9180 ||| |||| Sbjct 62605682 TCCTGCAAG 62605674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720837168016600