Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq1 246 4e-60 seq15 91.5 2e-13 seq11 87.8 2e-12 >seq1 Length=215897965 Score = 246 bits (272), Expect = 4e-60 Identities = 249/324 (77%), Gaps = 0/324 (0%) Strand=Plus/Minus Query 1878 GTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACA 1937 || || |||| | |||| ||||| ||||| ||||||||||| || |||||||| |||| Sbjct 131320780 GTTTCACAAAGCCGCTCAACCCCACTGATGGTGAATGGGGTTCTGGGGGAGTCAGTAATT 131320721 Query 1938 CTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGCACTACAACGGC 1997 || |||||||| ||||| || || |||| |||| |||||||||| |||| ||||| || Sbjct 131320720 CTTCCCCTGGAGTTTCCTGCTGGAGAGAGGATCCAGTCCATCACTTGGCTTTACAATGGA 131320661 Query 1998 ACCTCCATCGCCTTTATTGCCCCCTCGGAGGCCAAGAGCCCCCAGATCCACCTAACCAAT 2057 || || | ||||| || | | ||| || |||| || || | |||||| | || || Sbjct 131320660 ACATCTCTTGCCTTCATAGTACTCTCTGAAACCAACAGTCCAAAAATCCACATGACTCAT 131320601 Query 2058 CCGAAACTGGGCAAGCGACTCAACTTCACGCAGTCCTACTCCCTACAACTGAGCAACCTA 2117 || |||| | |||||||| |||||||| |||||||||||||| |||| |||||||| Sbjct 131320600 CCTAAACAGCAAAAGCGACTGAACTTCACCCAGTCCTACTCCCTGAAACTCAGCAACCTG 131320541 Query 2118 GAGATGGAAGACACCGGGTCCTACAGTGCCCTGATGTCCTCCGAGACCACAGTTAACGTT 2177 |||||||||||||| || || |||||||||| ||| || | |||||| | | || | Sbjct 131320540 GAGATGGAAGACACAGGCTCTTACAGTGCCCAGATAACCACAGAGACCTCTGCAAAGCTG 131320481 Query 2178 TCCAGCTACACGCTGAGGATCTTC 2201 ||||| || || |||||||| ||| Sbjct 131320480 TCCAGTTATACTCTGAGGATATTC 131320457 Score = 223 bits (246), Expect = 4e-53 Identities = 203/256 (79%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 2206 AACTGAAGAACATTCAGGTGAGCAATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGA 2265 |||||| |||||| || || | |||| ||||||| || | || |||| ||| ||| |||| Sbjct 131315196 AACTGAGGAACATACAAGTTAACAATTACAGTCAGCTATTTCGGAATAGGACCTGTGAGA 131315137 Query 2266 TCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGGGAGGCCT 2325 |||||||||| || ||||| |||||| | ||||||| |||| |||| ||||||||||| Sbjct 131315136 TCCATCTGACTTGCTCTGTGGAGGATGCGGATGACAATGTCTCATTCAGATGGGAGGCCT 131315077 Query 2326 TGGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGGAACAGCA 2385 |||| | || ||| | | ||||| ||| |||| ||||||||||||||||||| || Sbjct 131315076 TGGGAAGCACACTTTCAAGTGAGCCAAACATCACTACCTCCTGGGACCCCAGGATTTCCA 131315017 Query 2386 GTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCT 2445 |||| ||| ||||||| ||||| || || || ||||| |||||| | || ||| | |||| Sbjct 131315016 GTGAACAGGACTACACCTGCATAGCAGAGAATGCTGTCAGCAATTTATCCTTCTCTGTCT 131314957 Query 2446 CGGCCCAGAAGCTGTG 2461 | ||||||||||| || Sbjct 131314956 CTGCCCAGAAGCTTTG 131314941 Score = 199 bits (220), Expect = 5e-46 Identities = 236/324 (73%), Gaps = 17/324 (5%) Strand=Plus/Plus Query 1878 GTCTCCCAAACCAGCTCCACCCCGCTGATCGTGAATGGGGTGCTCGGGGAGTCCGTAACA 1937 || || |||| |||||| ||||| |||| ||||||||||| || |||||||| ||||| Sbjct 133106093 GTTTCACAAAGCAGCTCAACCCCATTGATGGTGAATGGGGTTCTGGGGGAGTCAGTAACT 133106152 Query 1938 CTGCCCCTGGAATTTCCCGCGGGCGAGAAGATCAAGTCCATCACCTGGCACTACAACGGC 1997 || |||||||| ||||| || || |||| |||| |||||||||| |||| | || || Sbjct 133106153 CTTCCCCTGGAGTTTCCTGCAGGAGAGAGGATCCAGTCCATCACTTGGCTTTGCAGTGGG 133106212 Query 1998 ACCTCCATCGCCTTTATTGCCCCCTCGGAGGCCAAGAGCCCCCAGATCCACCTAACCAAT 2057 || || | ||||| || || | | || ||| || | || || Sbjct 133106213 ACATCTTTTGCCTTCAT-----------------AGGGTACACAAATCTACGTGACTCAT 133106255 Query 2058 CCGAAACTGGGCAAGCGACTCAACTTCACGCAGTCCTACTCCCTACAACTGAGCAACCTA 2117 |||||| | |||||||| ||| |||| ||||||||||||| |||| |||||||| Sbjct 133106256 CCGAAATGGTAAAAGCGACTGAACCTCACCCAGTCCTACTCCCCGTAACTCAGCAACCTG 133106315 Query 2118 GAGATGGAAGACACCGGGTCCTACAGTGCCCTGATGTCCTCCGAGACCACAGTTAACGTT 2177 |||||||||||||| || || ||||| |||||||| || | |||||| | | || | Sbjct 133106316 GAGATGGAAGACACAGGCTCTTACAGGGCCCTGATAGCCACAGAGACCTCTGCAAAGCTA 133106375 Query 2178 TCCAGCTACACGCTGAGGATCTTC 2201 ||||| ||||| |||||||| ||| Sbjct 133106376 TCCAGTTACACTCTGAGGATATTC 133106399 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/85 (86%), Gaps = 4/85 (5%) Strand=Plus/Minus Query 2661 CACCTCAGACCAAAACATGCTAAACATAACACACCAGCA----GACTGACTCTTTGATAA 2716 ||| |||| ||||||||||||||| |||||||||||||| |||| ||||||||||| Sbjct 131310370 CACTTCAGGCCAAAACATGCTAAAGATAACACACCAGCACATTGACTCTCTCTTTGATAA 131310311 Query 2717 ATAAGCTAATGGAATTATGGTTGAC 2741 ||||| ||||||||| |||||||| Sbjct 131310310 CTAAGCAAATGGAATTGTGGTTGAC 131310286 >seq15 Length=160576332 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 14178 CCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCT 14237 ||||| ||||| || | || |||||||| ||| ||||||||||| || || | |||| Sbjct 28144542 CCTTCGTGTTGCACATGGCACGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCT 28144483 Query 14238 ACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGA 14297 |||| || || || || ||||| || || || | || || | |||| || || || Sbjct 28144482 GCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACGAGCTCCGTGTCCTGG 28144423 Query 14298 CTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAA 14357 | || || || ||||| || | ||| || | | | || || || || || || |||| Sbjct 28144422 GTCTGTTCCTCCCCGTCCCGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGG 28144363 Query 14358 GCCCAGCACC 14367 |||||||||| Sbjct 28144362 GCCCAGCACC 28144353 >seq11 Length=58747148 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/171 (73%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 177663 AATCTAACCTACTCTACAAATGACACCTAAATCTCTATCAAGTGGTTCTTTAATAATCAA 177722 || || |||| ||| ||||||||||| |||||| |||| |||||||| || | || Sbjct 44706354 AACCTGACCTGCTCCACAAATGACACTGGAATCTCCATCAGTTGGTTCTTCAAGGACCAG 44706295 Query 177723 AATATATCATCATCACAGAAAATAGAGCTGTGCCGGGACCATAAAACCCTCAGAATAGAC 177782 | | | |||| || ||| || |||||| || |||| | | ||| |||| ||| || Sbjct 44706294 AGTCTCCCATCCTCGGAGAGGATGAAGCTGTCCCAGGACAACACCACCTTCAGCATAAAC 44706235 Query 177783 CCGGTC--GAGAGAGGAT-TTGGGACGACATCACTGTGAGGTCTCCAACCT 177830 || ||| |||||||||| ||||| ||| |||||||||| |||||| Sbjct 44706234 CCTGTCAAGAGAGAGGATGCTGGGAACTATTCA-TGTGAGGTCTTCAACCT 44706185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626769614784040