Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq21 237 2e-57 seq19 111 2e-19 seq5 82.4 9e-11 >seq21 Length=146407008 Score = 237 bits (262), Expect = 2e-57 Identities = 333/468 (71%), Gaps = 3/468 (1%) Strand=Plus/Plus Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222 ||| |||| | || ||||||||||| |||||||| |||||||| || || | |||||| Sbjct 40657216 TTTGAACATCAGGCAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATT 40657275 Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGA 37282 ||||| || | || ||||| | |||| ||| || | ||| ||||| | ||||||| | Sbjct 40657276 GGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATA 40657335 Query 37283 TCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGA 37342 |||||||||| | ||||| |||| ||||| |||||| |||| ||| | || | Sbjct 40657336 ACCAGAAAAGA---TGCCTTCCGCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGC 40657392 Query 37343 ACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGT 37402 | || |||||| | |||||||||||| || ||||| || || Sbjct 40657393 NTCTTTGTCCCCAATCCAGNGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGT 40657452 Query 37403 TTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAG 37462 |||||| || || | |||||| | |||||| |||| |||| ||||| || | || Sbjct 40657453 TTCAATGGCATTGAGGAGAAATTCCCTTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAG 40657512 Query 37463 TAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCT 37522 ||||||||||||||||| || || ||||| || || || || || ||| | ||||| | Sbjct 40657513 GAAACTATACATTTCAGAATGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCG 40657572 Query 37523 AGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCC 37582 ||||| | | ||||| || | ||| | || | ||||||||||| ||||| || Sbjct 40657573 GGCTTCTGTCATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCC 40657632 Query 37583 ATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 37630 |||||| |||||||||||| | ||||||| |||||||| ||| || Sbjct 40657633 ATCACTTGCTGCAAAGAAAACCAGAACATGGGATATAAAATCTCTCTC 40657680 Score = 179 bits (198), Expect = 4e-40 Identities = 322/462 (70%), Gaps = 9/462 (2%) Strand=Plus/Minus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || ||||| | ||| |||||||| ||||| || || || | |||||| ||||| || | Sbjct 135420649 CAAGCAAAGTAACAGTGTAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGG 135420590 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 || ||||| | |||| ||| || | ||| ||||| ||||||||| ||||||||| | Sbjct 135420589 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCAGTGCAAAAGAACCAGAAAAGCAG 135420530 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAA--CTATAATCAG 37353 | | ||| ||| ||||| ||| ||| |||| || | | | | || | || Sbjct 135420529 GTGCTTTCCACTAGGGCAAACGCTGCAACACGTTCTCC-ATGGGTAACGTCTTTGTTCCC 135420471 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 || |||| | |||| ||||||| || ||||| || |||||||||| || | Sbjct 135420470 AA-TCCAATACAAGACCCAAACTGCCTTCTTCTTGACACAGGCA-TTGTTTCAATGGCAT 135420413 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 | |||||||| | |||||| ||||| | || | || ||||| || | | ||| | Sbjct 135420412 TGAAGAGAAATTCCCTTTCTTTGTTATCTTTAATGT--GTGTCAATAAGGAGATTATTTA 135420355 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 | ||||| || || ||||| ||||| | || || ||||| || || | ||| | || Sbjct 135420354 TGTCAGAATGTATGTTTTCTATAGCAGTTTGGAAGCCATAGAAGCAGAAGGTTTCTG-TA 135420296 Query 37534 AT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCT 37592 || |||| || | || ||| | | |||||||||| ||||||||||||| ||| Sbjct 135420295 ATCTGAATTTCTTGAACAAATTGTTCCACCAAGTTTTCATCTACTATCCCATCACATGCT 135420236 Query 37593 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 37634 ||||||||||| |||| ||| |||||||| |||||| ||| Sbjct 135420235 GCAAAGAAAGCCAGAATATAGGATATAAAATATCTTTCCTCA 135420194 >seq19 Length=137426304 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 |||||||||| || || | |||||| ||||| || | ||||||||| | |||||| || | Sbjct 98059013 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCT 98059072 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | ||| ||||| || ||||||||||| || |||||||| ||||| || || ||||| | Sbjct 98059073 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 98059132 Query 37318 CTAC 37321 | || Sbjct 98059133 CCAC 98059136 Score = 84.2 bits (92), Expect = 3e-11 Identities = 107/144 (74%), Gaps = 4/144 (3%) Strand=Plus/Minus Query 36823 TTTTTTAAAAATCTTCATCTAACGTAAA--TTTTATTTCCTTATTACTATTCATAACTCC 36880 |||||||||||||| |||| || || || | |||| | | || || ||||||| | Sbjct 118922279 TTTTTTAAAAATCTGCATCCAAGGTGAAGATGTTATCTG-TGGTTTCTGC-CATAACTGC 118922222 Query 36881 CATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATAT 36940 | ||||| || ||||||| | || || |||||||| |||||||||| || || Sbjct 118922221 AAAACGCTGATACTCCGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAAT 118922162 Query 36941 ATTTTCCATAAAATCAAATGGATT 36964 ||||||||||||||||| ||||| Sbjct 118922161 GTTTTCCATAAAATCAAAAGGATT 118922138 >seq5 Length=126811233 Score = 82.4 bits (90), Expect = 9e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930 ||| |||||||| | ||||| || || |||| |||| || || || || |||||||||| Sbjct 9679683 CATCACTCCCATCCTCTGATACTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTTCCTT 9679625 Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | ||||| ||||| |||||||| |||||||| || Sbjct 9679624 CCAGTGAAATATTCTCCATAAAGTCAAATGGGTT 9679591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589950871985960