Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq10 129 5e-25 seq7 118 9e-22 seq5 109 4e-19 seq12 104 2e-17 seq15 100 2e-16 seq16 93.3 3e-14 >seq10 Length=67975966 Score = 129 bits (142), Expect = 5e-25 Identities = 127/164 (77%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || || |||| ||| || |||||||||||||| || | ||||||||||||||| || || Sbjct 12442647 AGGCCCGTGATGTGCGCAATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGC 12442706 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || |||||||| ||||| |||||||| ||||| || || ||||| | || | Sbjct 12442707 ACACCTAGGCCCATGTCTCCCGATCTCTGGTACAGCTGGCAGGACAGCTCACTGTTCACC 12442766 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGAG 30032 || || ||||| || | || ||||| ||||| || ||||| || Sbjct 12442767 ACATAGAACTGGCAGAGGGCATGGCATGGAGGCAGTGCCATCAG 12442810 Score = 118 bits (130), Expect = 9e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||| || |||| ||||| || ||||||||||||||||| || || || || |||| ||| Sbjct 12446837 CATATCTCTGTATTCTGCCCCAAAATGCCTCCACTGGAAGCCATAAACTGGACCCAAGTC 12446896 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 || ||||| ||| ||| ||| ||||||||||||||| ||| || ||||| || Sbjct 12446897 CCCTTCTTCTCTGGTGGAGAACCCCAGGCTGTCCAAAAAGTCTCGGGATCCATTGGCATC 12446956 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGAccc 30317 |||||| || || ||||| || |||||||| | |||||||| || Sbjct 12446957 CCAGATTTTCACTCCCTTGGAAGACAGCTCTTTAGCATTTGTGGATCC 12447004 >seq7 Length=99894491 Score = 118 bits (130), Expect = 9e-22 Identities = 187/261 (72%), Gaps = 9/261 (3%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 32679817 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 32679758 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||||| |||||| || || ||||||||||||||||| ||| ||| ||||||| || Sbjct 32679757 TAAAGGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACTCATAATCACCAGATT 32679698 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 32679697 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATTCC 32679639 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCT-GGACA 112316 || || || |||| ||||| || || || || |||||||||||| ||| ||||| Sbjct 32679638 TGAG---CGGCGGCAGCCAGGGCAGGTCCCCATTCTTGCCGATGCCCATGTTCTAGGACA 32679582 Query 112317 CACGGCCACGATACCGTTCAG 112337 || || ||||| | ||| || Sbjct 32679581 CA--GCGACGATGCAGTTTAG 32679563 >seq5 Length=126811233 Score = 109 bits (120), Expect = 4e-19 Identities = 183/260 (70%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || | |||||||| |||| || || || | | Sbjct 62494277 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTATCTGCTGAGAACTAAATTAATTCTACCCTT 62494218 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||||| |||||| || | ||||||||||||||||| ||||||| ||||||| || Sbjct 62494217 TAAAGGTCGATTCTTCTCAGAAATGGAGAACCAAGTCTTCTTACCCATAATCACCAGATT 62494158 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTCGA-AAGTGTTTAAAATCTTTGC 112258 ||| || ||| |||||||| || | |||| | ||| | || | | | || || || | Sbjct 62494157 CTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTAGAAATATCTGAATTCATTCC 62494099 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGACAC 112317 || || |||| ||||| || | ||| || |||||||||||| ||||| || Sbjct 62494098 TGAG------CGGCGGCCAGGGCAGGTCCCTGTTCTTGCCGATGCCCATGTTCTGG-GAC 62494046 Query 112318 ACGGCCACGATACCGTTCAG 112337 || || ||||| | ||| || Sbjct 62494045 ACAGCGACGATGCAGTTTAG 62494026 >seq12 Length=181502896 Score = 104 bits (114), Expect = 2e-17 Identities = 179/259 (69%), Gaps = 8/259 (3%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || | |||||||| |||| || || || | | Sbjct 13887826 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTNTCTGCTGAGAACTAAATTAATTCTANCCTT 13887885 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | ||||| |||||| || || ||||||||||| |||| |||||||| ||||||| || Sbjct 13887886 NAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTACCTACCCATAATCACCAGATT 13887945 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTTGC 112258 ||| || ||| |||||||| | | |||| | ||| | || | | || || || | Sbjct 13887946 CTGTTTACCTTCTACTGAAGAAGGTGTGGTC-ATTCTCTGGAAATACCTGAATTCATTCC 13888004 Query 112259 AAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATGTCTGGACACA 112318 || ||| |||| ||||| || || || || || |||||||||| | | ||| Sbjct 13888005 TGAG------CGGAGGCCAGGGCAGGTCCCCATTCTTGCCAATGCCCATGTTTTGGGACA 13888058 Query 112319 CGGCCACGATACCGTTCAG 112337 | || ||||| | ||| || Sbjct 13888059 CAGCGACGATGCAGTTTAG 13888077 >seq15 Length=160576332 Score = 100 bits (110), Expect = 2e-16 Identities = 182/262 (69%), Gaps = 12/262 (5%) Strand=Plus/Minus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCC--CTGCTGAGGACTACGTTTATCCTGTCT 112137 ||||||||| || || || || || || |||||||| |||| || || || | Sbjct 22446911 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTTTCTGCTGAGAACTAAATTAATTCTACCC 22446852 Query 112138 CTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACG 112197 | | | ||| |||||| || || ||||||||||||||||| ||| | | ||||||| Sbjct 22446851 TTTAAANGTCGATTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACNCNTAATCACCAGA 22446792 Query 112198 TTCTGCTTGCCTCTGACTGAAGACGTAGCGGTCAAGGCTC-GAAAGTGTTTAAAATCTTT 112256 ||||| || ||| |||||||| || | |||| | ||| | || | | | || || || Sbjct 22446791 TTCTGTTTACCTTCTACTGAAGAGGTTGTGGTC-ATTCTCTGGAAATATCTGAATTCATT 22446733 Query 112257 GCAAAGTCTCGCAGGATGCCACGGCAGATCTCCGTTGTTCCCGATGCCCATG-TCTGGAC 112315 | || || |||| ||||| || || || || |||||||||||| ||||| Sbjct 22446732 CCTGAG------CGGCGGCCAGGGCAGGTCCCCNTTCTTGCCGATGCCCATGTTCTGG-G 22446680 Query 112316 ACACGGCCACGATACCGTTCAG 112337 |||| || ||||| | ||| || Sbjct 22446679 ACACAGCGACGATGCAGTTTAG 22446658 >seq16 Length=174288623 Score = 93.3 bits (102), Expect = 3e-14 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 112080 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCT 112139 ||||||||| || || || || || || |||||||| |||| || || || | | Sbjct 10775552 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAATTAATTCTACCCTT 10775611 Query 112140 CAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTT 112199 | |||| ||||| || || ||||||||||||||||| ||| ||| ||||||| || Sbjct 10775612 TAAAGGTNGNTTCTTCTCAGGAATGGAGAACCAAGTCTTCTTACNCATAATCACCAGATT 10775671 Query 112200 CTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 112231 ||| || ||| |||||||| || | ||||| Sbjct 10775672 CTGTTTACCTTCTACTGAAGAGGTTGTGGTCA 10775703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 407026237352177