Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq282846 194 3e-44 seq21 118 2e-21 seq6 93.3 8e-14 seq1 89.7 1e-12 >seq282846 Length=626 Score = 194 bits (214), Expect = 3e-44 Identities = 191/245 (78%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 241385 AGCTGCTGACAGCCTTGGC--ACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCT 241442 ||| |||||||||| | || ||||| | || ||||| ||||||||| |||||||||| Sbjct 13 AGCAGCTGACAGCCGTTGCTGACATGGGTCAT--GACCTTCTGTTTGAGCTGGGCCACCT 70 Query 241443 GGTCCCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCA 241502 | ||||| || | | |||||| | ||||| || ||||| || | ||||||| ||||| Sbjct 71 GCTCCCGGAGGAGGCCGGCGGTACTCGACAGCCCCGCGTTCTCGGCCTTGAGCGTCTTCA 130 Query 241503 CTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCA 241562 | || |||||||| ||||||||||| ||||| || ||| ||||| |||||||| |||| Sbjct 131 CCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTTCCGCTTCCGGCACTTGGTGGCCGCCA 190 Query 241563 AGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCG 241622 |||||||| || | ||| || ||| | |||||||| || ||||| ||||||| ||| | Sbjct 191 GCCGGTTCCGCAGCCGCTTGCGCTCCACTTTGATGCGCTCTTGGTCTTCCATGTTGATGG 250 Query 241623 GAGAC 241627 | ||| Sbjct 251 GGGAC 255 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/115 (77%), Gaps = 8/115 (7%) Strand=Plus/Plus Query 238926 TCTGTTTGAGTTGGGCCACCCGGTCCCGCAGAACGGACGCGGTATTGGACAGACCCGCGT 238985 |||||||||| ||||||||| | ||||| || | | |||||| | ||||| ||||||| Sbjct 50 TCTGTTTGAGCTGGGCCACCTGCTCCCGGAGGAGGCCGGCGGTACTCGACAGCCCCGCGT 109 Query 238986 TATCAGACTTGAGCAT--------TCTCCTCCAGCCGCGCGATGCGTTCCAGCTT 239032 | || | ||||||| | | |||||||| ||||||||||| |||||||| Sbjct 110 TCTCGGCCTTGAGCGTCTTCACCTTGTCCTCCAGGCGCGCGATGCGCTCCAGCTT 164 >seq21 Length=146407008 Score = 118 bits (130), Expect = 2e-21 Identities = 540/848 (64%), Gaps = 35/848 (4%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||| || |||| ||||| |||||||||||||| ||||| | | || || ||||| Sbjct 40656947 CTGATACTCCCTTACTCTCTTCTCAAAGAAGTTCGTCTTTCAGT-----GAAATATTCTC 40657001 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTAT-ACACCCGTG-TCAGGCCCATCTGTTCCAGC 47956 ||| ||| || ||||| | | | | | | || || | | |||| |||||||| Sbjct 40657002 CATAAAGTCAAATGGGTTC--TCTACTCTGAAAACCTTGCTAAAACCCA---GTTCCAGC 40657056 Query 47957 AGGTGA-TCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 | || || || || |||| ||||||| ||| || ||| ||||| || || | Sbjct 40657057 ATGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATAGG 40657116 Query 48016 GGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAAT 48075 ||| ||||| |||| ||||| || | || |||||| | || || | | || Sbjct 40657117 CTTCACAGGCAAGGCCTCAGTGAGGAATTTCTGTTCTATCCGAACAGCATTGATAATTAT 40657176 Query 48076 CTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 | | || | |||| ||||||| |||||| ||| | | || ||| || Sbjct 40657177 TTCTCTTACTCTCTACTCCAGTGGTTTGTGTACCAGGTGTTTGA---ACATCAGGCAAGC 40657233 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 ||| || | ||| || || || || | ||| || || | ||||| || ||| ||||| Sbjct 40657234 AAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGG 40657293 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | || | | ||||||||||| || | || ||| | |||| | |||||||| Sbjct 40657294 CATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAG---AAAAGATGCC 40657350 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 ||| |||| || || | | | || || | | ||| | ||||| ||||| Sbjct 40657351 TTCCGCTGCAGCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGTCCCCAATCCA 40657410 Query 48316 G-GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | ||| ||||| |||||||||||||||| || |||||||| || ||||| || || Sbjct 40657411 GNGCAAG-GCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATTGAGGA 40657469 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG-------TAC 48427 | | || | | | | | | | | | || || || | | ||| Sbjct 40657470 G------AAATTCCCTTTCTTTGGGATCTTTTAT-GTAAGTGTCTGTAAGGAAACTATAC 40657522 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 || ||||| || | || || || || || ||||| || |||| | ||| || | Sbjct 40657523 ATTTCAGAATGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTGTC 40657582 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 | ||| |||||| | |||| ||||| || || ||||| ||||| ||||| || Sbjct 40657583 ATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTTGCT 40657642 Query 48548 GCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAG 48607 |||||||| | || ||||| | |||| | ||| ||| | | || | | |||| Sbjct 40657643 GCAAAGAAAACCAGAACATGGGATATAAAATCTCTCTCCTTGGGCTTCAGGGATTCCCAG 40657702 Query 48608 CCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTT 48667 | | ||| ||| ||||||||| || || | ||||||||||| || || || Sbjct 40657703 TGCCAAATGTCCTTGGACAGGTCCACCTCCTCGGCGGTCCAGAAGGAAGCNTCCGCCTTC 40657762 Query 48668 TTGTACAT 48675 || ||||| Sbjct 40657763 TTATACAT 40657770 >seq6 Length=126788305 Score = 93.3 bits (102), Expect = 8e-14 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 213528 GTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGG 213587 |||||||||| || || |||||||||||||||||| |||||| ||||||||||| ||| Sbjct 66014830 GTGTACTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTGG 66014889 Query 213588 TTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCT 213641 ||| || || | || ||||| ||||||||||| || |||| || || ||| Sbjct 66014890 -TTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATATACGGGGTGCCTGTTTCT 66014943 >seq1 Length=215897965 Score = 89.7 bits (98), Expect = 1e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 241499 TTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCT 241558 |||||||| ||||||||||| ||||| | ||||| || | ||||| |||| ||| Sbjct 57416988 TTCACTTTTTCCTCCAGCCGGGCGATTCTCTCCAGCTTTCTTTTTCGGCACTTGGAGGCA 57417047 Query 241559 GCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCG 241618 || | |||||||| | | ||| | ||||||||||| || |||||| ||||||||| Sbjct 57417048 GCAATGCGGTTCCTCATGCGCTTCCTCTCCGCCTTGATCCGCTCCTGGGACTCCATGTCA 57417107 Query 241619 ATCGGAGAC 241627 || || ||| Sbjct 57417108 ATGGGGGAC 57417116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927811920316160