Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq21 132 9e-26 seq5 93.3 8e-14 >seq21 Length=146407008 Score = 132 bits (146), Expect = 9e-26 Identities = 393/595 (66%), Gaps = 16/595 (3%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| ||||||| |||||||| | || |||||||||||| ||| | || Sbjct 40657782 GANATCTGGCAGATGTATAAGAAGGCGGANGCTTCCTTCTGGACCGCCGAGGAGGTGGAC 40657723 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT--ATCCAAAGACGAGCAGCATTTTCTCA 25591 ||| |||||||||| |||| | | || | || ||| ||| || ||||| | Sbjct 40657722 CTGTCCAAGGACATTTGGCACTGGGAATCCCTGAAGCCCAAGGAGAG-AG-ATTTTATAT 40657665 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | || ||| ||||||||||| |||||| ||||| || || || || ||| Sbjct 40657664 CCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGC 40657605 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 |||| | | ||||| ||| || ||| ||||||| || ||||| || |||| Sbjct 40657604 GATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTNTGGCTTCCAAATTGCCA 40657545 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTT-CTGATGACGTACATTACAGACGTC 25770 | ||||| | || ||||| ||||| ||| | || || ||||| | ||| | Sbjct 40657544 TNGAAAACATACATTCTGAAATGTATAGTTTCCTTACAGAC-ACTTACATAAAAGATCCC 40657486 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCG 25830 || || || || | |||||| || || || | |||||| |||||| Sbjct 40657485 AAAGAAAGGGAATTTCTCCTCAATGCCATTGAAACGATGCCTTGTGTCAAGAAGAAGGCA 40657426 Query 25831 CGGTGGGCCATGAAGTGGATCAACAGCCAGAG-CGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||| || ||||| | || || ||||| | ||| || || | |||| Sbjct 40657425 GATTGGGCCTTGCNCTGGATTGGG-GACAAAGANGCTACCTGTGGTGAACGTGTTGTAGT 40657367 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||||||||| | ||| |||||||||| |||| ||||| | || ||||||||||| Sbjct 40657366 CTTTGCTGCAGCGGAAGGCATCTTTTCT---GGTTATTTTGCATCGATATTCTGGCTCAA 40657310 Query 25950 GCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 | | | | |||| ||||| || || |||||||| || || || ||||| || |||| Sbjct 40657309 G-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGATGAGG 40657251 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063 || | ||| | |||||||| |||||| | | || ||| || | |||||||| Sbjct 40657250 GTTTACACTGTGATTTTGCTTGCCTGATGTTCA---AACACCTGGTACACAAACC 40657199 >seq5 Length=126811233 Score = 93.3 bits (102), Expect = 8e-14 Identities = 97/125 (78%), Gaps = 2/125 (2%) Strand=Plus/Plus Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944 |||||||||||||| ||||| |||||||| || |||||| ||||| | || |||||| Sbjct 9677451 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 9677510 Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003 |||||| | | | |||| ||||| || || |||||||| || || |||||||| || Sbjct 9677511 CTCAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 9677569 Query 26004 CGAGG 26008 |||| Sbjct 9677570 TGAGG 9677574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 925134657162560