Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq7 311 1e-79 seq12 192 7e-44 seq17 120 3e-22 seq18 87.8 2e-12 >seq7 Length=99894491 Score = 311 bits (344), Expect = 1e-79 Identities = 664/987 (67%), Gaps = 15/987 (2%) Strand=Plus/Minus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 || ||| || |||| ||| |||| ||| || | |||||| || |||| || ||||| || Sbjct 77393011 CAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAACTTATTGGC 77392952 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| ||| | || ||||||| || ||| || | || || | ||| || Sbjct 77392951 AAACAAGTGGTG---GTTGCGCAGCATCCAGTTCAAGTCACCAGCTCCAAAAATGCACAC 77392895 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 || || | ||| || || | ||| || ||||| | || || || | || ||||| || Sbjct 77392894 CGAGCGCACGTGGACCCCATCGCAGGGAGGGTAGGGGGCACCCTTGGAAACATCACCCTC 77392835 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||| |||||||| ||||||||||| | || |||||||| || ||||| || | Sbjct 77392834 AAAGTATTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCGTACTTATG 77392775 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | || || || | || || | ||| | ||||||||| || | || Sbjct 77392774 GCTGGCAGAAAGTGAGCCCGGGACTTCAGGAATCCTCTGGATGGTGGCCCAGAGATACTC 77392715 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 || |||||||| ||||| | | ||| ||||| |||| | || | | | | || Sbjct 77392714 ATCAGGGCTGTATGTGTCTTGCGCCCACTCCATAAACTTTTGGAGTTTTTCATTCTGTAG 77392655 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 || | || || ||| | || |||||||| || ||||| || || | ||| | Sbjct 77392654 TACATACCCCACATACTCTCTACTGACCACAAAGTAGGCACTGCCAGAAAAAAGAGGTGT 77392595 Query 160472 ---GGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAG 160528 | | ||| || | |||| | || ||||| | || | ||| || | | Sbjct 77392594 TTCGAGCGGAGGAAGCAT---TTTGACAGTCCCTGTGTTTGTCAGCTTTCCATTAATGAC 77392538 Query 160529 CGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACT 160588 | | | ||||| |||||||| | || || | |||||| | ||||| || || || Sbjct 77392537 CTCATACCGCTTTTTCCACCTTTCTTCTTTATGGGATGGCATCCTCTCCGTTTCCAGGCT 77392478 Query 160589 GTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAA 160648 ||| | || | | | ||||||| | |||| || |||||||| || || | ||||| Sbjct 77392477 GTTTTCTCCCATTAACAACTTCAGCTTCCTGACAATTTCTAGGTTGGTTTTAATAGGAAA 77392418 Query 160649 GTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCT 160708 || |||| || | ||||||| ||||||||| || || |||| | | |||||| | Sbjct 77392417 ATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGAGGTCCTT 77392358 Query 160709 CATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTT 160768 |||||| |||| || ||||| || |||||||| || || || || || |||| | | Sbjct 77392357 CATGCAGTTAAGGTCAGCCTGAACCCGGCTCCACGATGCATAAACCACACTCTCCAATCG 77392298 Query 160769 ACTGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAA 160825 |||||||||||||| ||| |||||| || |||| || ||| | || | | || | Sbjct 77392297 GCTGGCCACAAAGACATTACTGAAACAGGAAGCGATGCCTGTCACTGCAGCTAAATAGGA 77392238 Query 160826 CATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGC 160885 ||| || | ||| |||||| || | |||||| | ||||||||| |||||||| Sbjct 77392237 -ATC--CTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGCATATAGATGGC 77392181 Query 160886 CCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGG 160945 ||| |||| ||| || | ||| || ||||| ||||| | ||| ||||| || ||||| || Sbjct 77392180 CCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGCTATTGG 77392121 Query 160946 AAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATA 161005 |||||| | ||| || ||| |||| | | || || || ||||||| ||| | Sbjct 77392120 AAACTCTGCCTCTTCTTTACTAAGGGGTTCTACAATATATTTGCGTCTCTTGATGAAAGA 77392061 Query 161006 ATCACAATCCCGCGTCATGTTGATATA 161032 | ||| || | |||||||| ||||| Sbjct 77392060 AGTACAGTCACTGGTCATGTTTATATA 77392034 >seq12 Length=181502896 Score = 192 bits (212), Expect = 7e-44 Identities = 228/309 (74%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 168155 AGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAA 168214 ||| | ||| | | |||| || ||||| || || || || || |||||||| |||||| | Sbjct 31241204 AGTGAGGCAAGCTGTTCCTGAGATCTTCCCAGAACCAAAGGTATTGAAGAGACACATGTA 31241145 Query 168215 GCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAA 168274 || ||||| ||||||| |||| ||||||| || || | ||||||||| |||| |||| Sbjct 31241144 ACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGAGTTTTGGAGTCCCAG 31241085 Query 168275 CTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCT 168334 ||| || ||||||| || ||||| | ||| || | || || || ||||||||||| Sbjct 31241084 CTGGGTAATGTTCATCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGTTCTCGCT 31241025 Query 168335 GAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAAC 168394 ||||||| ||||||| || ||||| || || | |||||||| || || ||||| || Sbjct 31241024 GAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAATCAGGAC 31240965 Query 168395 CTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTC 168454 || | | | ||||| || ||||| | ||||| ||||||| |||| | |||| || Sbjct 31240964 TTCCTGGGCATTTTGCAGAGAGCATCTTAAGGAAGCAGGAGTGTACAGCTGCTCTCTTTC 31240905 Query 168455 ATCTTGAGT 168463 ||| || || Sbjct 31240904 ATCCTGGGT 31240896 Score = 93.3 bits (102), Expect = 5e-14 Identities = 153/220 (70%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 167883 GTTTGCCGTATGTCCGTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTT 167942 ||||||| | ||| || ||||| |||| || || |||| ||| |||||||| || Sbjct 31243763 GTTTGCCTAAAGTCAGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCC---TTC 31243707 Query 167943 CCTACTTGACTCTTTGGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTG 168002 || || ||| |||| || ||||| || || | ||||| || ||| || || ||||| Sbjct 31243706 CCCACCTGATTCTTAGGGTCTTTGACCTGGAGGATGCTGGTAACAGACGTGGTCCCATTT 31243647 Query 168003 CGATGTAAAACGGTTTTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATT 168062 | || | | || || || || ||||||||||| | | ||||||||||| || Sbjct 31243646 GGGTGAGACAGCGTCACTGTACTATTTTCAATCCCTGACCGAGGGACCTTCCAGAAGATC 31243587 Query 168063 ACAGGAGCGGGTCGTGCTGTAGCAGAGCAGGTAATATTTA 168102 | || || || || || || |||||||| || || |||| Sbjct 31243586 ATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATGTTTA 31243547 >seq17 Length=170588018 Score = 120 bits (132), Expect = 3e-22 Identities = 217/316 (69%), Gaps = 5/316 (2%) Strand=Plus/Plus Query 160047 TGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTA 160106 |||| |||| | || |||| |||||||| ||| || | ||||||||| ||| | ||| Sbjct 22011645 TGTCTCAGAAGATCATCCAAACATTGGATGGCAAAGAGGTCAACGTCAATGTCAAGCTTA 22011704 Query 160107 TTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACG 160166 || || || | ||||| || | || ||||||| || ||| || | ||||| | | Sbjct 22011705 TTGGCAAATAAGTGGTGC---TTGCGCAGCATCCAGTTCAAGTCACCAGCTCCGAAAATG 22011761 Query 160167 CAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCA 160226 || || || | |||| | || | ||| | ||||| |||| ||||| | || ||| Sbjct 22011762 CACACCGAGTGATTGTGGTCCCCATCGCA--GTGGGTAGGGAGCACCTTTGGAAACATCA 22011819 Query 160227 CCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTAT 160286 || || ||||||||||||| |||||||| || | || |||||||| || ||| || Sbjct 22011820 CCCTCCAAGTACTGCCACTTGACAAACCTAGCAACTGCATGCATGTCAGACAAGTCATAC 22011879 Query 160287 TTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGG 160346 || | | || | | |||||| || | || |||| ||| | ||| |||| || Sbjct 22011880 TTATGGTTTGTGGAGAGTGAACCGGGGACTTCAGGAATACTCTGGATGGTATCCCAGAGA 22011939 Query 160347 TGTTCGTCGGGGCTGT 160362 || || || ||||||| Sbjct 22011940 TGCTCATCAGGGCTGT 22011955 Score = 82.4 bits (90), Expect = 9e-11 Identities = 225/340 (66%), Gaps = 11/340 (3%) Strand=Plus/Plus Query 160618 TGACGATCTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTT-TATCACGTAC 160676 |||| || |||||||| | || | || || || |||| || ||||| || || ||| Sbjct 22012205 TGACAATTTCTAGGTTAGATTTAATGGGCAAATCCATACCACA-AAGTTATACCAAGTAT 22012263 Query 160677 TTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGG 160736 ||||| || ||| | | ||||| ||||||| || | || ||||| || || Sbjct 22012264 TTCCAGCCTGCAGTCATTGCTTAGTGGTCCTTCATGCAGTTGAGGTCAGCCTGAACCTGG 22012323 Query 160737 CTCCAGGAAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACAC 160796 ||||| || | || || || |||| | | || ||||| ||||| ||| |||||| Sbjct 22012324 CTCCATGATGTATAAACCACAGTCTCCAATCAGCTCGCCACGAAGACTTTACTGAAACAG 22012383 Query 160797 GACACGATTCCCACCACC---GCCAGAAA--GAACATCTTATCCGCCTTTCGGTCCACGT 160851 | | | |||| ||| || | ||| || | ||| || ||| |||||||| Sbjct 22012384 AATGCAGTGCCCATCACTCTAGCTAAAAATGGATCCTCTGATT----TTTTTGTCCACGT 22012439 Query 160852 GCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTA 160911 | | || | | | ||||||||| ||||||||||| | | ||| | | ||| || | Sbjct 22012440 GAATGCGAAAGAAATTCTGAGGCATATAGATGGCCCTCGGTAGCCTGTAAAGCATTTCAA 22012499 Query 160912 TCTTATGATGGATCACGATAGAGTAGGCTATCGGAAACTC 160951 |||| ||||| | | ||||| || ||| | ||||||| Sbjct 22012500 TCTTGTGATGAACTGCTATAGAATATGCTGTTTGAAACTC 22012539 >seq18 Length=153844193 Score = 87.8 bits (96), Expect = 2e-12 Identities = 196/290 (68%), Gaps = 7/290 (2%) Strand=Plus/Minus Query 160097 GTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGA 160156 ||| || || || || ||||| || || || ||| || |||||||||| ||| || | Sbjct 34750122 GTCAAACTTGTTGGCCAACAGGTGATG-GCTTTCA--AGCATCCAGTGCAAGTCCCCAGC 34750066 Query 160157 CCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTT 160216 ||| | || |||| | || ||| | || |||||| || |||| || || Sbjct 34750065 CCCATAAACACAGATAGCCCGCTGGTGGATTCCAGAGCAAGGGCCATAAGGAGCACCCTT 34750006 Query 160217 CGCCACGTCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGA 160276 | | ||| || || | || ||||||||| || | |||||| || | |||||| || Sbjct 34750005 ATCAATGTCTCCCTCATGGTCCTGCCACTTGACCAGCCTGGCAATAGAAGTCATGTCTGA 34749946 Query 160277 GGTGTCGTATTTGTACATCAGGGGAACGGCACCGGGAA--CGCCGGGCATACGCTGTAGG 160334 | |||| || ||| |||||| | || || | | ||| ||| ||||| ||| Sbjct 34749945 GATGTCATACTTGGGGTGGTTGGGAACAGAGCCAGGCATCCACCGTGCA--CGCTGAAGG 34749888 Query 160335 GTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCAT 160384 |||||||| |||||||| || ||||| || ||||| || |||||| || Sbjct 34749887 GTGGCCCAGAGGTGTTCATCAGGGCTATAGGTGTCTTTTACCCATTCAAT 34749838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574913577273240