Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq21 109 8e-19 >seq21 Length=146407008 Score = 109 bits (120), Expect = 8e-19 Identities = 292/442 (66%), Gaps = 15/442 (3%) Strand=Plus/Plus Query 18158 CACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAAC 18217 || ||||||||| ||||||||| ||||||||| || | ||| || ||| || | Sbjct 40657229 CAAGCAAAATCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGG 40657288 Query 18218 CCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAAT 18277 || ||||| | |||| ||| || ||||| ||||||||||| ||| || |||||||| Sbjct 40657289 CCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAATAACCAGAAAAGA-- 40657346 Query 18278 ATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAAACTGTATTTATTGCTCAG 18336 | || || | ||| || || ||| | | |||| || | | | ||| | Sbjct 40657347 -TGCCTTCCGCTGCA-GCAAAGACTACAACACGTTCACCACAGGTAGCNTCTTTGTCCCC 40657404 Query 18337 TATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATT 18396 ||||| ||||| ||| | | | ||| || || | || || ||||| Sbjct 40657405 AATCCAGNGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATGGCATT 40657464 Query 18397 AA--ACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATAC 18454 | | |||| || ||||||||| ||||||||| |||||||| | | ||| |||| Sbjct 40657465 GAGGAGAAAT--TCCCTTTCTTTGGGATCTTTTATGTAAGTGTCTGTAAGGAAACTATAC 40657522 Query 18455 ATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGA 18514 ||||||||||||||| |||| || || || || || | | | || | | || || | Sbjct 40657523 ATTTCAGAATGTATGTTTTCNATGGCAATTTGGAAGCCANAGAAACAGCGGGCTTCTGTC 40657582 Query 18515 TATTGAA--TC-TCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCA 18571 |||| || | ||| ||||| || ||||| || ||||| ||||| || ||| Sbjct 40657583 ATCTGAACTTCTTGGCT---AAATCGCTCCACCAAGTTTTCATTTACTATGCCATCACTT 40657639 Query 18572 GATGCGAAAAATGCCAAAACAT 18593 | ||| || || ||| ||||| Sbjct 40657640 GCTGCAAAGAAAACCAGAACAT 40657661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728948637928400