Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13 131 3e-25 seq21 123 4e-23 seq9 109 1e-18 seq2 91.5 3e-13 >seq13 Length=81577475 Score = 131 bits (144), Expect = 3e-25 Identities = 173/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| ||||| || || | ||| | ||||| ||| || |||||| Sbjct 45553204 TTTCTTAGCACCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 45553263 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || |||| ||| || |||||||| || | ||| || || Sbjct 45553264 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 45553323 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || |||||||| ||| ||||| || Sbjct 45553324 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 45553383 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || ||||| || || || | ||||| | ||| ||||||||||| Sbjct 45553384 GGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 45553443 >seq21 Length=146407008 Score = 123 bits (136), Expect = 4e-23 Identities = 171/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | ||||| || | | ||| | ||||| ||| || |||||| Sbjct 111222772 TTTCTTAGCACCACCACGAAGTCTCAACNCAAGATGAAGAGTAGACTCCTTNTGAATATT 111222713 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| ||| | || |||| ||| || |||||||| || | ||| || || Sbjct 111222712 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 111222653 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 ||||| || |||||||| ||||| || || || |||||||| ||| |||| || Sbjct 111222652 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCATATCCGA 111222593 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || ||||| || || | | ||||| | ||| ||||||||||| Sbjct 111222592 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCATTTT 111222533 >seq9 Length=88628999 Score = 109 bits (120), Expect = 1e-18 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| ||||| || | | ||| | ||||| ||| || |||||| Sbjct 60029921 TTTCTTAGCACCACCANGAAGTCTCAACGCAAGATGAAGAGTAGACTCCTTTTGAATATT 60029862 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952 || || || |||| | | | || |||| ||| || |||||||| || ||| || | Sbjct 60029861 GTAGTCAGACAAAGTCCATCCATCTTCCAGTTGCTTGCCAGCAAAGATCCCTCTTTGCTA 60029802 Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012 |||| || |||||||| ||||| || || || |||||||| ||| ||||| || Sbjct 60029801 AGCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGA 60029742 Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 | ||| || || || || ||||| || || | | ||||| ||||| ||||||||||| Sbjct 60029741 GGGTTCAACCTCAAGGGTGATGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTT 60029682 >seq2 Length=86128551 Score = 91.5 bits (100), Expect = 3e-13 Identities = 169/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892 |||| || |||||| | |||| || || | ||| | ||||| ||| || ||| | Sbjct 46415502 TTTCTTAGCACCACCACGAAGTGTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTG 46415443 Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTG--TTTACCAGCAAAAATTAATCTCTGT 171950 || || || |||| | | | || |||| ||| ||| | |||||| || | ||| || Sbjct 46415442 -TAGTCAGACAAAGTACATCCATCCTCCAGTTGCTTTTGCTAGCAAAGATCAGTCTTTGC 46415384 Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010 ||||| || |||||||| ||||| || || || |||||||| | | |||||| Sbjct 46415383 CCATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCT 46415324 Query 172011 GACGATTCTACTTCTAG---AGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || | ||| || || || ||| ||||| || || | | ||||| ||||| |||||| Sbjct 46415323 GAGGGTTCAACCTCGAGGTCAGTGATGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGC 46415264 Query 172068 ATTTT 172072 ||||| Sbjct 46415263 ATTTT 46415259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901520558704200