Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8 91.5 4e-13 seq21 89.7 2e-12 >seq8 Length=70300957 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || ||||| || ||||| || || ||||||| ||||| || || Sbjct 6521910 ACCAGTCTCAGCAGTCTTGACAGCCGTGTCAATGAGCCCCTCACGACCCCCCATGGCGTG 6521851 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 ||| || | ||| ||| || || | | ||||| |||| || || ||||| Sbjct 6521850 GAAAAAGAACTCGGTGGGTGTGAGGCCGGCTAGGTAGGAGTTCTCCACAAAGCCACGGCT 6521791 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||||||| | ||| |||| | ||||| ||||| |||| || || |||| |||| Sbjct 6521790 CTCGGGCCCGTAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATGG 6521731 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816 || ||||| || || ||||||||||| || Sbjct 6521730 AATCCGCTTGCCCTCCACGTTCTGCTGCCC 6521701 >seq21 Length=146407008 Score = 89.7 bits (98), Expect = 2e-12 Identities = 363/566 (64%), Gaps = 11/566 (2%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135 ||||| || ||||| || || || | || || |||||||||||||| || | | | | Sbjct 40657809 TTTGTCATCTTCCCCATCGAGTACCATGANATCTGGCAGATGTATAAGAAGGCGGANGCT 40657750 Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195 | || ||||| | || || || | ||||| ||| ||||||||| |||| Sbjct 40657749 TCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGGACATTTGGCACTGGGAATCCCTG 40657690 Query 133196 ACTGGGGATGAAAAACATTTTAT-TTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254 | | || | | ||||||| | | ||| || | | || ||||| || |||||||| Sbjct 40657689 AAGCCCAAGGAGAGAGATTTTATATCCCATG-TTCTGGTTTTCTTTGCAGCAAGTGATGG 40657631 Query 133255 TATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCG 133314 || || |||||| || | || |||| ||||||||| || | |||||||| Sbjct 40657630 CATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATGACAGAAGCCCG 40657571 Query 133315 TGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCT 133374 || | ||| | || ||||| || ||||| || |||||| | ||| | || Sbjct 40657570 CTGTTTCTNTGGCTTCCAAATTGCCATNGAAAACATACATTCTGAAATGTATAGTTTCCT 40657511 Query 133375 AATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--AGC 133432 | || |||||||| |||||| || | | | | || |||| |||||| | | Sbjct 40657510 TACAGACACTTACATAAAAGATCCCAAAGAAAGGGAATTTCTCCTCAATGCCATTGAAAC 40657451 Query 133433 GAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGT 133492 || | |||||| | || ||||| | || ||||| | ||||| |||||| Sbjct 40657450 GA--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCNCTGGATTGGGGACAAAGAN 40657393 Query 133493 GCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGT 133552 || | | || | ||| | || | ||||||| || || ||||| |||| |||| Sbjct 40657392 GCTACCTGTGGTGAACGTGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTTTT---CTGGT 40657336 Query 133553 GCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTC 133611 || ||| || || || ||||| || || || || | | ||||| || ||||| Sbjct 40657335 -TATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTC 40657277 Query 133612 TAACGAACTTATTTCAAGGGACGAGG 133637 || ||||||||| || || |||| Sbjct 40657276 CAATGAACTTATTAGCAGAGATGAGG 40657251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1465791652646013