Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq138701 132 4e-26 >seq138701 Length=588 Score = 132 bits (146), Expect = 4e-26 Identities = 213/304 (70%), Gaps = 4/304 (1%) Strand=Plus/Plus Query 34335 ACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAAC 34394 |||||| ||||| | |||| || ||||| ||||| | || ||| || | |||| Sbjct 1 ACATTCAGGACAGAGAACAATTTTTTTAATGAATCCATCCAACATGTCTTGCAGCTTATT 60 Query 34395 GGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGC 34454 || || || || ||||| ||| | || || || || ||| | ||| || || || Sbjct 61 CACCTCATGAGATCCATTGACAATGTAACGGTCATTCTTAACATCAAACTGGGTCTGTGC 120 Query 34455 GCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGC 34514 |||||||| || || || || || || || || | | || || ||||||||| || Sbjct 121 TCCCAGCTCACAACCAAAATATTTGGTGGGATACGTTGGAGGCCGATTAAGCGCCTTTGC 180 Query 34515 GATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGC 34574 || || ||||||||| || || |||||||| || || || || || ||||||||||| Sbjct 181 AATGTCAACCATGTTGACTATAACTGTCTTGATTCCATTTCCTTTGCCCTCGACCTTGGC 240 Query 34575 --GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTC 34632 |||| || ||||| |||||||| |||||| ||| | ||| ||||||| || || Sbjct 241 AATCAGA--CGGGGCATCTTGTAGCGATAGAACTGGTCTGACACGCTGCGGTTGACATTG 298 Query 34633 ACAG 34636 |||| Sbjct 299 ACAG 302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411233786969657