Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq21 116 3e-21 seq13 114 1e-20 seq8 100 2e-16 seq7 96.9 3e-15 seq3 95.1 9e-15 seq2 91.5 1e-13 seq9 89.7 4e-13 seq18 82.4 6e-11 >seq21 Length=146407008 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 29581 AAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGT 29640 |||||||| || | || ||||||||||| | || | | || || ||| || ||| Sbjct 1220597 AAATGAAGAGTAGGCTCCTTTTGAATGTTGCAGTCAGACAAAGTACGTCCATCTTCCAGT 1220538 Query 29641 TGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAAT 29700 || | ||||||| | |||| |||||||||||| || ||||| || || || || || | Sbjct 1220537 TGCTCGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 1220478 Query 29701 TTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCA 29760 || || ||| ||||| | || || || |||| || ||||| || ||||| || || Sbjct 1220477 TTGGCCTTTACATTTTCTGCCGTATCTGAGGGTTCAACCTCAAGGGTGATAGTCTTCCCC 1220418 Query 29761 GTTAAGGTTTTAACAAATATCTGCATTTT 29789 ||| |||||| ||||| |||||||||| Sbjct 1220417 CTTAGGGTTTTCACAAAAGTCTGCATTTT 1220389 Score = 95.1 bits (104), Expect = 9e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || || || || ||||| || || || | | || || ||| || ||||| Sbjct 111222739 ATGAAGAGTAGACTCCTTNTGAATATTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTG 111222680 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | |||| |||||||||||| || ||||| || || || || || | || Sbjct 111222679 CTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 111222620 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| |||||| | || || |||| || || || || || || || || | Sbjct 111222619 GGCCTTTACATTTTCTATCATATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCCAT 111222560 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 | ||||| || || ||||||||||| Sbjct 111222559 AAGAGTTTTCACGAAAATCTGCATTTT 111222533 >seq13 Length=81577475 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||||| || || || | | || || ||| Sbjct 45553228 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 45553287 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 45553288 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 45553347 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || || |||| || || || || || || Sbjct 45553348 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 45553407 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || | |||||| || || ||||||||||| Sbjct 45553408 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 45553443 >seq8 Length=70300957 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || |||| |||||| |||| || || || || || || || ||||| || || | | Sbjct 14508789 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 14508848 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || || ||||| ||| | || | || ||||| || || || Sbjct 14508849 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 14508908 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||| ||||| | ||| || ||| |||| | |||||| | || || Sbjct 14508909 ATGCCTTCTTTATCTTGGATTTTGGCCTTTACATTTTCGATGGTGTCACTGGGCTCCACC 14508968 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || ||||| || | ||| || || || ||||||||||| Sbjct 14508969 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 14509018 >seq7 Length=99894491 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| || || || |||||||| || || || | | || || ||| Sbjct 60057489 CAACACAAGATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTACGTCCATC 60057548 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| | ||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 60057549 TTCCAGTTGCTGGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTCTC 60057608 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || | | |||||| || || || |||| || ||||| || || || Sbjct 60057609 CTGGATCTTGGCCTTTATATTTTCTATCGTATCCGAGGGTTCAACCTCAAGGGTGATGGT 60057668 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || | | |||||| || || |||||| |||| Sbjct 60057669 CTGCCCCATAAGGGTTTTCACGAAAATCTGCGTTTT 60057704 >seq3 Length=123372783 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || ||||||||||| || || ||||| |||| || ||||| || || | Sbjct 107248230 CCACCTCACAGACGCAGCACCAGGTGCAGGGTGGACTCTTCCTGGATGTTCTAGTCTGAG 107248289 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| ||| || || |||||||| ||| |||||| | ||||| || ||| | Sbjct 107248290 AGACTGCAGCCATCCTCCAGCTGTTTGCCCGCAAATATCAGACACTGCTGGTCAGGCAGG 107248349 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||||| | || ||||||| | || ||||||| || || Sbjct 107248350 ATGCCCTCCTTGTCTTGGATTTCGGCTTTGACATTCTCAGTGGTGTCAGTGGCCTCCACC 107248409 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || | || ||||| | | ||| || ||||| |||||||| Sbjct 107248410 TCAAGGGTGACGGTCTTGCCCATGAGGGTGTTCACAAAGATCTGCAT 107248456 >seq2 Length=86128551 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/216 (69%), Gaps = 13/216 (6%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA-AT 29632 || ||| | |||||| || || || ||||||||||| || || ||| || Sbjct 25049885 CAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTC------------AGACAT 25049932 Query 29633 CATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGT 29692 | || | ||| ||||||||| | |||| |||||||||||| || ||||| || || || | Sbjct 25049933 CTTCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 25049992 Query 29693 CTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAG 29752 | || | || || ||| ||||| || | | |||| || ||||| || || | Sbjct 25049993 CCTGGATATTGGCCTTTACATTTTCTGTTGTATTCAAGGGTTCAACCTCAAGGGTGATGG 25050052 Query 29753 TTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 | || || || | |||||| || || |||||||||| Sbjct 25050053 TCTTACCTGTAAGGGTTTTCACGAAAATCTGCATTT 25050088 >seq9 Length=88628999 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || || || |||||||| || || || | | || | ||| || ||||| Sbjct 60029888 ATGAAGAGTAGACTCCTTTTGAATATTGTAGTCAGACAAAGTCCATCCATCTTCCAGTTG 60029829 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||||||||| | ||| |||||||| | | || ||||| || || || || || | || Sbjct 60029828 CTTGCCAGCAAAGATCCCTCTTTGCTAAGCAGGAGGAATTCCTTCCTTATCCTGGATCTT 60029769 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| |||||| || || || |||| || ||||| || || || || || | Sbjct 60029768 GGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCAAGGGTGATGGTCTTCCCCAT 60029709 Query 29763 TAAGGTTTTAACAAATATCTGCATTTT 29789 | |||||| | || ||||||||||| Sbjct 60029708 AAGGGTTTTCATGAAAATCTGCATTTT 60029682 >seq18 Length=153844193 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 29562 TCCCCTCAAACGCA--GCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | ||| |||||| || || ||||| ||||| || ||||||||||| | | Sbjct 76916320 TCACCTCAGAGGCAAAGCACCACCTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAA 76916261 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||| | ||| || | |||||||| || |||||| ||||| || || | Sbjct 76916260 AGAGTGTGGCCATCCTCCAACTGTTTGCCCACAAATATCAGATGCTGCTGGTCAGGTAGG 76916201 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| ||||| || | || ||||||| |||| | |||||| | | | Sbjct 76916200 ATGCCCTCCTTGTCATGGATCTTGGCTTTGACATTTTCACCGGTGTCACTGGGCTGGAAC 76916141 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| || || ||| | || || | ||| || ||| | |||||||| Sbjct 76916140 TCAAAGGTGATGGTTCTTCCTGTGAGGGTCTTTACAGAGATCTGCAT 76916094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383718962501409