Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq7 210 3e-49 seq12 194 2e-44 seq15 145 9e-30 >seq7 Length=99894491 Score = 210 bits (232), Expect = 3e-49 Identities = 604/921 (66%), Gaps = 11/921 (1%) Strand=Plus/Minus Query 162067 TTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCTCATCGAAC 162126 ||||| | | || ||| || | |||||||| || || | ||| ||| | || ||| Sbjct 77393019 TTATGCCTCAAATGCTCATCCAAACACTGGATGGCAAAGAGGTCAACATCCACGTCAAAC 77392960 Query 162127 TTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCGATCCGAAC 162186 || || || |||| ||| || ||| || ||||| || | || || | ||| || Sbjct 77392959 TTATTGGCAAACAAGTGGTG---GTTGCGCAGCATCCAGTTCAAGTCACCAGCTCCAAAA 77392903 Query 162187 ACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCATCGTCCACA 162246 | |||||| || |||||||| || || ||| || || || |||| || | | ||| Sbjct 77392902 ATGCACACCGAGCGCACGTGGACCCCATCGCAGGGAGGGTAGGGGGCACCCTTGGAAACA 77392843 Query 162247 TCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGGAGGTGTCG 162306 || ||||| ||||||||||||| || ||||| | | || |||||||| || ||| Sbjct 77392842 TCACCCTCAAAGTATTGCCACTTGACAAACCTGGCAACTGCTTGCATGTCAGACAAATCG 77392783 Query 162307 TACTTGTACACTGACGGCACG-GCTCCAGGAACACCCGGCAGTCTCTGTAGAGTAGCCCA 162365 ||||| | ||| | | | | | || || || | || | ||||| | || ||||| Sbjct 77392782 TACTTATGG-CTGGCAGAAAGTGAGCCCGGGACTTCAGGAATCCTCTGGATGGTGGCCCA 77392724 Query 162366 CAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGACCGTTTT 162425 || | || || || || || || || | || ||||||||| |||| || ||| Sbjct 77392723 GAGATACTCATCAGGGCTGTATGTGTCTTGCGCCCACTCCATAAACTTTTGGAGTTTTTC 77392664 Query 162426 ATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTACCAGAAAA 162485 || | ||| | || || || || | || | |||||| || || |||||||| Sbjct 77392663 ATTCTGTAGTACATACCCCACATACTCTCTACTGACCACAAAGTAGGCACTGCCAGAAAA 77392604 Query 162486 CACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCATTCCCTC 162545 | ||| | | ||||| || |||| | || ||||| | | |||| | Sbjct 77392603 AAGAGGTGTTTCGAGCGGAGGAAGCATTTTGACAGTCCCTGTGTTTGTCAGCTTTCCATT 77392544 Query 162546 TACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTA-GACGGGTGTTCGGTCT 162604 | |||| | | | ||| ||||||| | |||| ||| | | | || || | Sbjct 77392543 AATGACCTCATACCGCTTTTTCCACCTTTCT-TCTTTATGGGATGGCATCCTCTCCGTTT 77392485 Query 162605 CTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGATTGGTCTTAA 162664 | || ||||| ||| || |||||||| | || || ||||| ||||| |||| Sbjct 77392484 CCAGGCTGTTTTCTCCCATTAACAACTTCAGCTTCCTGACAATTTCTAGGTTGGTTTTAA 77392425 Query 162665 GGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGAGTCCGTACA 162724 ||||| || | || || ||||| || | || ||||| || | || | | | || | Sbjct 77392424 TAGGAAAATCCATACCACAAAGATTTATCAAGTACTTCCAGTTTGCACTCATTGCATAGA 77392365 Query 162725 GATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACACGACGCTCT 162784 | |||| | ||||| || || ||||| || || |||||||| || || || || |||| Sbjct 77392364 GGTCCTTCATGCAGTTAAGGTCAGCCTGAACCCGGCTCCACGATGCATAAACCACACTCT 77392305 Query 162785 CCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCACGGCCAGTG 162844 |||| | |||| ||||||||||| |||||| ||| | || || |||| || | Sbjct 77392304 CCAATCGGCTGGCCACAAAGACATTACTGAAACAGGAAGCGATGCCTGTCACTGCAGCTA 77392245 Query 162845 AGAA--CATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCTGAGGGGCGTA 162902 | | ||| || | ||| | || || || | ||| || | ||||||||| || Sbjct 77392244 AATAGGAATC--CTCGGATTTTGTGTCCACATGAATGCAATAGAAATTCTGAGGCATATA 77392187 Query 162903 GATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGATAGAATACGC 162962 |||||||||||| | || || | ||| || ||||| || || ||||| |||||||| || Sbjct 77392186 GATGGCCCTCAGCAGCCTGTCAAGCATTTCAATCTTGTGATGAACCACTATAGAATATGC 77392127 Query 162963 TATGGGGAACTCAGCCTCCTC 162983 ||| || ||||| ||||| || Sbjct 77392126 TATTGGAAACTCTGCCTCTTC 77392106 >seq12 Length=181502896 Score = 194 bits (214), Expect = 2e-44 Identities = 238/325 (73%), Gaps = 0/325 (0%) Strand=Plus/Minus Query 171771 CATAGAGTGTCAGACAGGTCTTACCCGATATTTTTCCGGACCCAAAAGTATTAAACAAAC 171830 |||||| || || || | | || || || || || || ||||| ||||| || | || Sbjct 31241211 CATAGACAGTGAGGCAAGCTGTTCCTGAGATCTTCCCAGAACCAAAGGTATTGAAGAGAC 31241152 Query 171831 ACATAAAACAGCCTTCGTCCTCCACGGTGGTGTTCCAAAAAGTCAATGTAGAATTTCTGA 171890 |||| |||| ||||| ||||||| |||| | ||||| || || | || || ||| || Sbjct 31241151 ACATGTAACACCCTTCATCCTCCAGGGTGATATTCCAGAAGGTGATGGTTGAGTTTTGGA 31241092 Query 171891 GTCCGAGTTGCGTAATGTTCACCCGGTCCTTGTACGGAGGCTGGACGACAACACCGTGAT 171950 |||| || || |||||||||| | |||||| || | |||||||| || || || || | Sbjct 31241091 GTCCCAGCTGGGTAATGTTCATCTTGTCCTTATAGGCAGGCTGGATCACCACCCCATGGT 31241032 Query 171951 TCTCGCTGAACGTGGCCATGTTTTCGGGGCTCGTAGCCTTTATCTTCTGCCACGTTACTA 172010 |||||||||| ||| |||||||||| ||||| ||| || | |||||||| || || | Sbjct 31241031 TCTCGCTGAAGGTGACCATGTTTTCTGGGCTTACAGCTTTCTTTTTCTGCCATGTCACAA 31240972 Query 172011 TTAAAACTTCTTTGTCGGTTTGAAGAGAGCATCTTAAAGAAGCAGGTGTGTTCAATAATT 172070 | | ||||| | | | |||| |||||||||||||| |||||||| |||| || | Sbjct 31240971 TCAGGACTTCCTGGGCATTTTGCAGAGAGCATCTTAAGGAAGCAGGAGTGTACAGCTGCT 31240912 Query 172071 CCCTTTCGTCTTGCGTTACCACCTG 172095 | ||||| || || || | ||| || Sbjct 31240911 CTCTTTCATCCTGGGTCAGCACTTG 31240887 Score = 125 bits (138), Expect = 8e-24 Identities = 164/224 (73%), Gaps = 5/224 (2%) Strand=Plus/Minus Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562 || ||||| || | ||| || |||||||||| ||| | || | ||| |||||||||| Sbjct 31243766 ACGGTTTGCCTAAAGTCAGTCACAGTCCCCAGGTGCAGCACCTGGCAGATCACCTCCT-- 31243709 Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622 | ||||| ||| | ||||| ||||| || || || ||||| |||||||| || ||||| Sbjct 31243708 -TCCCCACCTGATTCTTAGGGTCTTTGACCTGGAGGATGCTGGTAACAGACGTGGTCCCA 31243650 Query 171623 TTACGATGTAGAACG-GTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAAAA 171681 || | || ||| | || ||||||||||| || || || | | || ||||| || Sbjct 31243649 TTTGGGTG-AGACAGCGTCACTGTACTATTTTCAATCCCTGACCGAGGGACCTTCCAGAA 31243591 Query 171682 TATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725 || | || ||||| | ||||| ||||||||||| ||||||| Sbjct 31243590 GATCATGGGGGCTGGGCGGGCAGTGGCAGAGCAAGTGATGTTTA 31243547 >seq15 Length=160576332 Score = 145 bits (160), Expect = 9e-30 Identities = 403/607 (66%), Gaps = 17/607 (3%) Strand=Plus/Minus Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946 ||||||||||||| ||| || | | |||||| |||| | || || | | | Sbjct 88356830 TCCAGTTAAAGTAACTAAGGTACAACTTATTGTTTTTGTCGACTTCCTTCAGATACTTTG 88356771 Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006 | || || | || || | || || | ||| |||||||| | ||| | || | ||||| Sbjct 88356770 CTAGCTCACTGGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATGTAAT 88356711 Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066 | || || || ||||| |||| ||| || || | ||||| | || |||| || || Sbjct 88356710 TCTCATAGTTTTCTCTAGATGGTCCCAGAACAACAGGTACAGAGCCAGCCAGAAAAGCAT 88356651 Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126 |||||| ||||| || || || ||| |||| | || || ||||| | ||||| |||| Sbjct 88356650 TGTAGAGCTTTTCTGTGATGTAATCCTTGTGGATTGAATTTTCAAAGGAAAGATAAAATT 88356591 Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184 |||| | ||||| ||| || || || | | ||| | ||| ||||| | | | | Sbjct 88356590 TACAAGTAGATATGGTA--GGAATCAAATTTTTATCATTGACATATTCTCCAAATGCTTG 88356533 Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243 ||| || ||| || || ||| ||| || ||||| ||| || || || || | | Sbjct 88356532 CCCATAGGTATGGATTTCAATGCTTTTGCTTAGCTCATTGTAATA-CTTGACCCTGGCAT 88356474 Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGA 177302 | || |||||| || || || |||||||| || ||||| |||||||| || || Sbjct 88356473 GCTCAGGGTTCCAGTTACTCACAACCCAGCACACCAACTT-CTCTTTGCTTGGCAC---- 88356419 Query 177303 TTC-GATACTAATGCAGTGTCTCTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCGA 177361 ||| | || || | | | || | ||| | | ||||| ||||| || ||||| || Sbjct 88356418 TTCAAACACGAAAGGATTTGTGCTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTGA 88356359 Query 177362 GTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATAC--CTTGTTTGAAGGGG 177419 |||||| | || || | || || || || | || || || | || |||| ||| Sbjct 88356358 GTCGCGGCGATAAGTCAGAGTCAGGTTAAACAAGTGCTCAATGCCACTCTTTTG--GGGA 88356301 Query 177420 CTGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCTGGGTTCC 177479 ||| | | || ||||| || |||||||| ||||| || || |||| ||| || | || | Sbjct 88356300 GTGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCTAGCTTGC 88356241 Query 177480 GTAGGTA 177486 ||||| Sbjct 88356240 TGAGGTA 88356234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576121532910400