Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nasalis_20larvatus_20[genbank_20GCA_5F000772465.1_202014-11-10] 319,549 sequences; 3,011,966,170 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 3e-17 seq9 98.7 3e-17 seq6 98.7 3e-17 seq18 86.0 2e-13 seq290507 82.4 2e-12 >seq15 Length=160576332 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 27487242 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 27487183 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 27487182 CCGGGTTTCGGC 27487171 Score = 80.6 bits (88), Expect = 8e-12 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832 || |||||||||||||||| | ||||||||||||||||||||||||||||| | || || Sbjct 71826019 AAATAGCTCAGTTGGGAGAACGTTAGACTGAAGATCTAAAGGTCCCTGGTTTGATCCTGG 71825960 Query 2833 GCTT 2836 | || Sbjct 71825959 GTTT 71825956 >seq9 Length=88628999 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 69927564 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 69927505 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 69927504 CCGGGTTTCGGC 69927493 >seq6 Length=126788305 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 13104339 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 13104398 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 13104399 CCGGGTTTCGGC 13104410 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 13113031 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 13113090 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 13113091 CCGGGTTTCGGC 13113102 >seq18 Length=153844193 Score = 86.0 bits (94), Expect = 2e-13 Identities = 50/52 (96%), Gaps = 0/52 (0%) Strand=Plus/Minus Query 2773 AAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 || |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 80012258 AAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 80012207 >seq290507 Length=556 Score = 82.4 bits (90), Expect = 2e-12 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 |||| |||| |||||||||||||||||| |||||||||| ||||| ||| |||||||| Sbjct 314 ATGGTTGAAATAGCTCAGTTGGGAGAGCTTTAGACTGAATATCTACAGGCTTCTGGTTCA 373 Query 2826 ACCCCGGGCTTCAGC 2840 | || ||| ||| || Sbjct 374 ATCCTGGGTTTCGGC 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15794204583105